Cellosaurus logo
expasy logo

Cellosaurus A-375 (CVCL_0132)

[Text version]
Cell line name A-375
Synonyms A 375; A375; A375-MEL; A375-mel; A375mel; 375
Accession CVCL_0132
Resource Identification Initiative To cite this cell line use: A-375 (RRID:CVCL_0132)
Comments Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Part of: COSMIC cell lines project.
Part of: MD Anderson Cell Lines Project.
Part of: Naval Biosciences Laboratory (NBL) collection (transferred to ATCC in 1982).
Population: Caucasian.
Doubling time: 26.9 +- 6.9 hours (PubMed=29275043); ~32 hours (PBCF).
Microsatellite instability: Stable (MSS) (Sanger).
Omics: Genomics; DNA methylation analysis.
Omics: Genomics; Whole exome sequencing.
Omics: Phenotyping; CRISPR screening.
Omics: Phenotyping; Drug screening.
Omics: Proteomics.
Omics: Proteomics; 2DE-MS.
Omics: Proteomics; Expression; Reverse-phase protein array.
Omics: Proteomics; PTM; Phosphorylation.
Omics: Proteomics; Quantitative.
Omics: Proteomics; Subcellular; Secretome.
Omics: Transcriptomics; Microarray.
Omics: Transcriptomics; RNAseq.
Omics: Variations; Array-based CGH.
Omics: Variations; SNP array analysis.
Misspelling: A-735; Note=Occasionally.
Derived from site: In situ; Leg, skin; UBERON=UBERON_0001511.
Sequence variations
  • Mutation; HGNC; HGNC:1097; BRAF; Simple; p.Val600Glu (c.1799T>A); ClinVar=VCV000013961; Zygosity=Homozygous (PubMed=12068308; PubMed=15467732; PubMed=26405815; PubMed=29492214; ATCC=CRL-1619; Cosmic-CLP=906793; DepMap=ACH-000219).
  • Mutation; HGNC; HGNC:1787; CDKN2A; Simple; p.Glu61Ter (c.181G>T) (p.Gly75Val, c.224G>T); ClinVar=VCV000376309; Zygosity=Homozygous (PubMed=29492214; ATCC=CRL-1619; Cosmic-CLP=906793; DepMap=ACH-000219).
  • Mutation; HGNC; HGNC:1787; CDKN2A; Simple; p.Glu69Ter (c.205G>T) (p.Gly83Val, c.248G>T); ClinVar=VCV000376308; Zygosity=Homozygous (PubMed=29492214; ATCC=CRL-1619; Cosmic-CLP=906793; DepMap=ACH-000219).
  • Mutation; HGNC; HGNC:11730; TERT; Simple; c.1-146C>T (c.250C>T) (C250T); Zygosity=Unspecified; Note=In promoter (PubMed=31068700).
HLA typing Source: PubMed=77569
Class I
HLA-AA*01,02
HLA-BB*12,13

Source: PubMed=25960936
Class I
HLA-AA*01:01,02:01
HLA-BB*44:03,57:01
HLA-CC*06:02,16:02
Class II
HLA-DQDQA1*03:02,02:01
DQB1*03:03,03:03
HLA-DRDRB1*04:05,07:01

Source: PubMed=26589293
Class I
HLA-AA*01:01,02:01
HLA-BB*44:03,57:01
HLA-CC*06:02,16:01
Class II
HLA-DQDQA1*03:02,02:01
DQB1*03:02,03:02
HLA-DRDRB1*04:05,07:01
Genome ancestry Source: PubMed=30894373

Origin% genome
African0.84
Native American0.49
East Asian, North1.69
East Asian, South0
South Asian0
European, North67.22
European, South29.75
Disease Amelanotic melanoma (NCIt: C3802)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Children:
CVCL_6546 (4-1.10)CVCL_E8SQ (A-375 Human CD228)CVCL_E8SR (A-375 Human CLDN18.2)
CVCL_XZ66 (A-375 Human EGFR vIII)CVCL_UD29 (A-375 KRAS p.G13D)CVCL_UD28 (A-375 MEK1 p.Q56P)
CVCL_JF22 (A-375 NRAS p.Q61K)CVCL_C8WV (A-375-Luc)CVCL_LC86 (A375 NRAS (Q61K/+/+))
CVCL_C3D8 (A375 NY-ESO-1 Knockout)CVCL_C0Q6 (A375 PLX/AZD-resistant)CVCL_E8FX (A375 RL)
CVCL_C3EX (A375 Safe Harbor Landing Pad)CVCL_C4RR (A375 XPA-mutated clone A3)CVCL_C4RS (A375 XPA-mutated clone A9)
CVCL_C4RT (A375 XPA-mutated clone B1)CVCL_2294 (A375-C5)CVCL_2295 (A375-C6)
CVCL_QZ67 (A375-eGFP-Puro)CVCL_C8YB (A375-ER-2)CVCL_QZ68 (A375-Fluc-Neo/eGFP-Puro)
CVCL_QZ69 (A375-Fluc-Neo/hNIS-Puro)CVCL_QZ70 (A375-Fluc-Puro)CVCL_QZ71 (A375-hNIS-Neo/eGFP-Puro)
CVCL_QZ72 (A375-hNIS-Puro)CVCL_QZ73 (A375-iRFP-Neo)CVCL_QZ74 (A375-iRFP-Neo/Fluc-Puro)
CVCL_QZ75 (A375-iRFP-Neo/hNIS-Puro)CVCL_B7NR (A375-Luc-RFP)CVCL_UR32 (A375-Luc2)
CVCL_B222 (A375-M)CVCL_X494 (A375-MA1)CVCL_C7GI (A375-NTP-R)
CVCL_6233 (A375-P)CVCL_6234 (A375-R)CVCL_A2CR (A375-R1)
CVCL_A1VP (A375-RMR)CVCL_5649 (A375-SM)CVCL_AP96 (A375-VR [2014])
CVCL_AQ00 (A375-VR [2015])CVCL_0136 (A375.S2)CVCL_IW10 (A375/R)
CVCL_R745 (A375PF11)CVCL_Y439 (A375S1)CVCL_XE59 (A375sci)
CVCL_B0ZF (Abcam A-375 IL13RA2 KO)CVCL_B7V4 (Abcam A-375 NT5E KO)CVCL_KS59 (CellSensor AP1-bla A375)
CVCL_KS16 (CellSensor SBE-bla A375)CVCL_6286 (DRO)CVCL_D6AF (HyCyte A-375 KO-hSETD2)
CVCL_E3GK (HyCyte A-375-Luc)CVCL_ZJ05 (LanthaScreen ERK2 A375)CVCL_YJ74 (LINTERNA A375)
CVCL_D7J3 (Ubigene A-375 B2M KO)CVCL_D7J4 (Ubigene A-375 B3GNT2 KO)CVCL_D7J5 (Ubigene A-375 IGF2BP1 KO)
CVCL_D7J6 (Ubigene A-375 MAGEA4 KO)CVCL_D7J7 (Ubigene A-375 PRAME KO)CVCL_D7J9 (Ubigene A-375 USP7 KO)
Sex of cell Female
Age at sampling 54Y
Category Cancer cell line
STR profile Source(s): AddexBio=C0020004/4992; ATCC=CRL-1619; CCRID; CLS=300110; Cosmic-CLP=906793; ECACC=88113005; IZSLER=BS TCL 88; PubMed=25056119; PubMed=25877200; Technion Genomics Center

Markers:
AmelogeninX
CSF1PO11,12
D1S165616,17.3
D2S44111
D2S133816,24
D3S135815,17
D5S81812
D7S8209
D8S117911,14
D10S124816
D12S39118,21
D13S31711,14
D16S5399
D18S5112,17
D19S43313,14.2
D21S1129,30
D22S104516
FGA23
Penta D9,15
Penta E10,12
TH018
TPOX8,10
vWA16,17

Run an STR similarity search on this cell line
Web pages Info; COPE; -; http://www.cells-talk.com/index.php/page/copelibrary?key=A375
Info; MCLP; -; https://tcpaportal.org/mclp/
Info; Synapse; PS-ON; https://www.synapse.org/#!Synapse:syn31544560
Provider; Altogen; Xenograft model; https://altogenlabs.com/xenograft-models/melanoma-xenograft/a375-xenograft-model/
Publications

PubMed=4357758; DOI=10.1093/jnci/51.5.1417
Donald J. Giard, Stuart A. Aaronson, George J. Todaro, Paul Arnstein, John H. Kersey, Harvey Dosik, Wade P. Parks;
In vitro cultivation of human tumors: establishment of cell lines derived from a series of solid tumors.
J. Natl. Cancer Inst. 51:1417-1423(1973)

PubMed=265522; DOI=10.1073/pnas.74.2.565; PMCID=PMC392331
Robert Neal Fabricant, Joseph E. De Larco, George J. Todaro;
Nerve growth factor receptors on human melanoma cells in culture.
Proc. Natl. Acad. Sci. U.S.A. 74:565-569(1977)

PubMed=327080; DOI=10.1093/jnci/59.1.221
Jorgen Fogh, Jens M. Fogh, Thomas Orfeo;
One hundred and twenty-seven cultured human tumor cell lines producing tumors in nude mice.
J. Natl. Cancer Inst. 59:221-226(1977)

PubMed=833871; DOI=10.1093/jnci/58.2.209
Jorgen Fogh, William C. Wright, James D. Loveless;
Absence of HeLa cell contamination in 169 cell lines derived from human tumors.
J. Natl. Cancer Inst. 58:209-214(1977)

DOI=10.1007/BF00199208
Josef Bruggen, Clemens Sorg, Egon Macher;
Membrane associated antigens of human malignant melanoma V: Serological typing of cell lines using antisera from nonhuman primates.
Cancer Immunol. Immunother. 5:53-62(1978)

PubMed=77569; DOI=10.1111/j.1399-0039.1978.tb01259.x
Jons Ake Espmark, Lena Ahlqvist-Roth, Lena Sarne, Anita Persson;
Tissue typing of cells in culture. III. HLA antigens of established human cell lines. Attempts at typing by the mixed hemadsorption technique.
Tissue Antigens 11:279-286(1978)

PubMed=375235; DOI=10.1073/pnas.76.3.1288; PMCID=PMC383236
Stephen A. Sherwin, Ann H. Sliski, George J. Todaro;
Human melanoma cells have both nerve growth factor and nerve growth factor-specific receptors on their cell surfaces.
Proc. Natl. Acad. Sci. U.S.A. 76:1288-1292(1979)

PubMed=22282976; DOI=10.1093/carcin/1.1.21
Rufus S. Day 3rd, Chuck H.J. Ziolkowski, Dominic A. Scudiero, Sharon A. Meyer, Michael R. Mattern;
Human tumor cell strains defective in the repair of alkylation damage.
Carcinogenesis 1:21-32(1980)

DOI=10.1007/BF00205883
Josef Bruggen, Egon Macher, Clemens Sorg;
Expression of surface antigens and its relation to parameters of malignancy in human malignant melanoma.
Cancer Immunol. Immunother. 10:121-127(1981)

PubMed=6954533; DOI=10.1073/pnas.79.7.2194; PMCID=PMC346157
Eric H. Westin, Robert Charles Gallo, Suresh K. Arya, Alessandra Eva, Lawrence M. Souza, Marcel Albert Baluda, Stuart A. Aaronson, Flossie Wong-Staal;
Differential expression of the amv gene in human hematopoietic cells.
Proc. Natl. Acad. Sci. U.S.A. 79:2194-2198(1982)

PubMed=6220172
Nicholas C. Dracopoli, Jorgen Fogh;
Polymorphic enzyme analysis of cultured human tumor cell lines.
J. Natl. Cancer Inst. 70:469-476(1983)

PubMed=6500159; DOI=10.1159/000163283
Merrill Eric Gershwin, Daniel Lentz, Robert B. Owens;
Relationship between karyotype of tissue culture lines and tumorigenicity in nude mice.
Exp. Cell Biol. 52:361-370(1984)

PubMed=6584666; DOI=10.1093/jnci/72.4.913
James M. Kozlowski, Ian R. Hart, Isaiah Joshua Fidler, Nabil Hanna;
A human melanoma line heterogeneous with respect to metastatic capacity in athymic nude mice.
J. Natl. Cancer Inst. 72:913-917(1984)

PubMed=3518877; DOI=10.3109/07357908609038260
Jorgen Fogh;
Human tumor lines for cancer research.
Cancer Invest. 4:157-184(1986)

PubMed=1832891; DOI=10.1016/0277-5379(91)90277-K
Johan Hansson, Anne Marie Josephine Fichtinger-Schepman, Margareta R. Edgren, Ulrik Ringborg;
Comparative study of two human melanoma cell lines with different sensitivities to mustine and cisplatin.
Eur. J. Cancer 27:1039-1045(1991)

PubMed=9670966; DOI=10.4049/jimmunol.161.2.877
Maria P. Bettinotti, Christina J. Kim, Kang-Hun Lee, Matthew Roden, Janice N. Cormier, Monica C. Panelli, Kenneth K. Parker, Francesco M. Marincola;
Stringent allele/epitope requirements for MART-1/Melan A immunodominance: implications for peptide-based immunotherapy.
J. Immunol. 161:877-889(1998)

PubMed=9973934; DOI=10.1016/S0165-4608(98)00122-8
Mark A. Nelson, Maria E. Ariza, Jin-Ming Yang, Floyd H. Thompson, Raymond Taetle, Jeffrey M. Trent, Julie Wymer, Kathy S. Massey-Brown, Marianne Broome-Powell, John Easton, Jill M. Lahti, Vincent J. Kidd;
Abnormalities in the p34cdc2-related PITSLRE protein kinase gene complex (CDC2L) on chromosome band 1p36 in melanoma.
Cancer Genet. Cytogenet. 108:91-99(1999)

PubMed=10497214; DOI=10.1074/jbc.274.40.28505
Maria E. Ariza, Marianne Broome-Powell, Jill M. Lahti, Vincent J. Kidd, Mark A. Nelson;
Fas-induced apoptosis in human malignant melanoma cell lines is associated with the activation of the p34(cdc2)-related PITSLRE protein kinases.
J. Biol. Chem. 274:28505-28513(1999)

PubMed=12068308; DOI=10.1038/nature00766
Helen R. Davies, Graham Robert Bignell, Charles Cox, Philip J. Stephens, Sarah Edkins, Sheila Clegg, Jon W. Teague, Hayley Woffendin, Mathew J. Garnett, William Bottomley, Neil Davis ...Show all 52 authors... , Ed Dicks, Rebecca Ewing, Yvonne Floyd, Kristian Gray, Sarah Hall, Rachel Hawes, Jaime Hughes, Vivian Kosmidou, Andrew Menzies, Catherine Mould, Adrian Parker, Claire Stevens, Stephen Watt, Steven Hooper, Rebecca Wilson, Hiran Jayatilake, Barry Austin Gusterson, Colin S. Cooper, Janet M. Shipley, Darren Hargrave, Kathy Pritchard-Jones, Norman J. Maitland, Georgia Chenevix-Trench, Gregory J. Riggins, Darell Doty Bigner, Giuseppe Palmieri, Antonio Cossu, Adrienne M. Flanagan, Andrew Nicholson, Judy W.C. Ho, Suet Yi Leung, Siu Tsan Yuen, Barbara L. Weber, Hilliard Foster Seigler, Timothy L. Darrow, Hugh F. Paterson, Richard Marais, Christopher John Marshall, Richard Wooster, Michael Rudolf Stratton, P. Andrew Futreal; Show fewer authors
Mutations of the BRAF gene in human cancer.
Nature 417:949-954(2002)

PubMed=14871852; DOI=10.1158/0008-5472.CAN-03-2209
Kevin T. Hogan, Michael A. Coppola, Christine L. Gatlin, Lee W. Thompson, Jeffrey Shabanowitz, Donald Frederick Hunt, Victor H. Engelhard, Mark M. Ross, Craig L. Slingluff Jr.;
Identification of novel and widely expressed cancer/testis gene isoforms that elicit spontaneous cytotoxic T-lymphocyte reactivity to melanoma.
Cancer Res. 64:1157-1163(2004)

PubMed=15009714; DOI=10.1046/j.0022-202X.2004.22243.x; PMCID=PMC2586668
Hensin Tsao, Vikas Goel, Heng Wu, Guang Yang, Frank G. Haluska;
Genetic interaction between NRAS and BRAF mutations and PTEN/MMAC1 inactivation in melanoma.
J. Invest. Dermatol. 122:337-341(2004)

PubMed=15467732; DOI=10.1038/sj.onc.1208152
Hideaki Tanami, Issei Imoto, Akira Hirasawa, Yasuhiro Yuki, Itaru Sonoda, Jun Inoue, Kohichiroh Yasui, Akiko Misawa-Furihata, Yutaka Kawakami, Johji Inazawa;
Involvement of overexpressed wild-type BRAF in the growth of malignant melanoma cell lines.
Oncogene 23:8796-8804(2004)

PubMed=17308088; DOI=10.1158/0008-5472.CAN-06-3311
Janiel M. Shields, Nancy E. Thomas, Melissa Cregger, Aaron J. Berger, Michael Leslie, Chad Torrice, Hong-Lin Hao, Shannon Penland, Jack Leonard Arbiser, Glynis A. Scott, Tong Zhou ...Show all 17 authors... , Menashe Bar-Eli, James E. Bear, Channing Joseph Der, William K. Kaufmann, David L. Rimm, Norman Edward Sharpless; Show fewer authors
Lack of extracellular signal-regulated kinase mitogen-activated protein kinase signaling shows a new type of melanoma.
Cancer Res. 67:1502-1512(2007)

PubMed=18172304; DOI=10.1158/0008-5472.CAN-07-1939
Marianna Sabatino, Ying-Dong Zhao, Sonia Voiculescu, Alessandro Monaco, Paul F. Robbins, Laszlo Karai, Brian J. Nickoloff, Michele Maio, Silvia Selleri, Francesco M. Marincola, Ena Wang;
Conservation of genetic alterations in recurrent melanoma supports the melanoma stem cell hypothesis.
Cancer Res. 68:122-131(2008)

PubMed=19727395; DOI=10.1371/journal.pone.0006888; PMCID=PMC2731225
Raymond Couric Wadlow, Ben S. Wittner, S. Aidan Finley, Henry Bergquist, Rabi Upadhyay, Stephen P. Finn, Massimo Loda, Umar Mahmood, Sridhar Ramaswamy;
Systems-level modeling of cancer-fibroblast interaction.
PLoS ONE 4:e6888.1-e6888.10(2009)

PubMed=20164919; DOI=10.1038/nature08768; PMCID=PMC3145113
Graham Robert Bignell, Christopher D. Greenman, Helen R. Davies, Adam P. Butler, Sarah Edkins, Jenny M. Andrews, Gemma Buck, Lina Chen, David Beare, Calli Latimer, Sara Widaa ...Show all 22 authors... , Jonathan Hinton, Ciara Fahey, Bei-Yuan Fu, Sajani Swamy, Gillian L. Dalgliesh, Bin Tean Teh, Panos Deloukas, Feng-Tang Yang, Peter J. Campbell, P. Andrew Futreal, Michael Rudolf Stratton; Show fewer authors
Signatures of mutation and selection in the cancer genome.
Nature 463:893-898(2010)

PubMed=20215515; DOI=10.1158/0008-5472.CAN-09-3458; PMCID=PMC2881662
S. Michael Rothenberg, Gayatry Mohapatra, Miguel N. Rivera, Daniel Winokur, Patricia Greninger, Mai Nitta, Peter M. Sadow, Gaya Sooriyakumar, Brian W. Brannigan, Matthew J. Ulman, Rushika M. Perera ...Show all 22 authors... , Rui Wang, Angela Tam, Xiao-Jun Ma, Mark Erlander, Dennis C. Sgroi, James W. Rocco, Mark W. Lingen, Ezra E.W. Cohen, David Neil Louis, Jeffrey Settleman, Daniel Arie Haber; Show fewer authors
A genome-wide screen for microdeletions reveals disruption of polarity complex genes in diverse human cancers.
Cancer Res. 70:2158-2164(2010)

PubMed=21343389; DOI=10.1158/0008-5472.CAN-10-2958; PMCID=PMC3070783
Amy E. Rose, Laura Poliseno, Jin-Hua Wang, Michael Clark, Alexander Pearlman, Gui-Min Wang, Eleazar Carmelo Vega y Saenz de Miera, Ratna Medicherla, Paul J. Christos, Richard Shapiro, Anna Pavlick ...Show all 17 authors... , Farbod Darvishian, Jiri Zavadil, David Polsky, Eva Hernando, Harry Ostrer, Iman Osman; Show fewer authors
Integrative genomics identifies molecular alterations that challenge the linear model of melanoma progression.
Cancer Res. 71:2561-2571(2011)

PubMed=21424129; DOI=10.3892/or.2011.1220
Antonella Manca, Maria Cristina Sini, Francesco Izzo, Paolo Antonio Ascierto, Fabiana Tatangelo, Gerardo Botti, Giusy Gentilcore, Marilena Capone, Nicola Mozzillo, Carla Rozzo, Antonio Cossu ...Show all 13 authors... , Francesco Tanda, Giuseppe Palmieri; Show fewer authors
Induction of arginosuccinate synthetase (ASS) expression affects the antiproliferative activity of arginine deiminase (ADI) in melanoma cells.
Oncol. Rep. 25:1495-1502(2011)

PubMed=21673604; DOI=10.1097/CMR.0b013e32834495c3; PMCID=PMC3131479
Jose L. Orgaz, Alberto Benguria, Cristina Sanchez-Martinez, Omar Ladhani, Olga V. Volpert, Benilde Jimenez;
Changes in the gene expression profile of A375 human melanoma cells induced by overexpression of multifunctional pigment epithelium-derived factor.
Melanoma Res. 21:285-297(2011)

PubMed=21857157; DOI=10.4161/cc.10.17.17068; PMCID=PMC5479465
Emilia Caputo, Luigi Maiorana, Valeria Vasta, Franca Maria Pezzino, Sudhir Sunkara, Kieran Wynne, Giuliano Elia, Francesco M. Marincola, James Andrew McCubrey, Massimo Libra, Salvatore Travali, Marian Kane;
Characterization of human melanoma cell lines and melanocytes by proteome analysis.
Cell Cycle 10:2924-2936(2011)

PubMed=22178978; DOI=10.1016/j.freeradbiomed.2011.11.019
Helen Swalwell, Jennifer Latimer, Rachel M. Haywood, Mark Anthony Birch-Machin;
Investigating the role of melanin in UVA/UVB- and hydrogen peroxide-induced cellular and mitochondrial ROS production and mitochondrial DNA damage in human melanoma cells.
Free Radic. Biol. Med. 52:626-634(2012)

PubMed=22460905; DOI=10.1038/nature11003; PMCID=PMC3320027
Jordi Ginesta Barretina, Giordano Caponigro, Nicolas Stransky, Kavitha Venkatesan, Adam A. Margolin, Sungjoon Kim, Christopher J. Wilson, Joseph Lehar, Gregory V. Kryukov, Dmitriy Sonkin, Anupama Reddy ...Show all 61 authors... , Manway Liu, Lauren Murray, Michael F. Berger, John E. Monahan, Paula Morais, Jodi Meltzer, Adam Korejwa, Judit Jane-Valbuena, Felipa A. Mapa, Joseph Thibault, Eva Bric-Furlong, Pichai Raman, Aaron Shipway, Ingo H. Engels, Jill Cheng, Guo-Ying K. Yu, Jian-Jun Yu, Peter Aspesi Jr., Melanie de Silva, Kalpana Jagtap, Michael D. Jones, Li Wang, Charles Hatton, Emanuele Palescandolo, Supriya Gupta, Scott Mahan, Carrie Sougnez, Robert C. Onofrio, Ted Liefeld, Laura E. MacConaill, Wendy Winckler, Michael Reich, Nan-Xin Li, Jill P. Mesirov, Stacey B. Gabriel, Gad Getz, Kristin Ardlie, Vivien Chan, Vic E. Myer, Barbara L. Weber, Jeff Porter, Markus Warmuth, Peter Finan, Jennifer L. Harris, Matthew Langer Meyerson, Todd Robert Golub, Michael P. Morrissey, William Raj Sellers, Robert Schlegel, Levi Alexander Garraway; Show fewer authors
The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity.
Nature 483:603-607(2012)

PubMed=23039341; DOI=10.1186/1476-4598-11-75; PMCID=PMC3554420
Sara A. Byron, David C. Loch, Candice L. Wellens, Andreas Wortmann, Jia-Yi Wu, John Wang, Kenichi Nomoto, Pamela M. Pollock;
Sensitivity to the MEK inhibitor E6201 in melanoma cells is associated with mutant BRAF and wildtype PTEN status.
Mol. Cancer 11:75.1-75.15(2012)

PubMed=24581590; DOI=10.1016/j.jdermsci.2014.01.006
Samuel Gehrke, Atsushi Otsuka, Roman Huber, Barbara Meier, Magdalena Kistowska, Gabriele Fenini, Phil Cheng, Reinhard Dummer, Katrin Kerl, Emmanuel Contassot, Lars Einar French;
Metastatic melanoma cell lines do not secrete IL-1beta but promote IL-1beta production from macrophages.
J. Dermatol. Sci. 74:167-169(2014)

PubMed=25056119; DOI=10.1158/0008-5472.CAN-14-1232-T; PMCID=PMC4167745
Ian R. Watson, Li-Ren Li, Peter K. Cabeceiras, Mozhdeh Mahdavi, Tony Gutschner, Giannicola Genovese, Guo-Can Wang, Zhuang-Na Fang, James M. Tepper, Katherine Stemke-Hale, Kenneth Y. Tsai ...Show all 14 authors... , Michael A. Davies, Gordon B. Mills, Lynda Chin; Show fewer authors
The RAC1 P29S hotspot mutation in melanoma confers resistance to pharmacological inhibition of RAF.
Cancer Res. 74:4845-4852(2014)

PubMed=25960936; DOI=10.4161/21624011.2014.954893; PMCID=PMC4355981
Sebastian Boegel, Martin Lower, Thomas Bukur, Ugur Sahin, John C. Castle;
A catalog of HLA type, HLA expression, and neo-epitope candidates in human cancer cell lines.
OncoImmunology 3:e954893.1-e954893.12(2014)

PubMed=25485619; DOI=10.1038/nbt.3080
Christiaan Klijn, Steffen Durinck, Eric W. Stawiski, Peter M. Haverty, Zhao-Shi Jiang, Han-Bin Liu, Jeremiah Degenhardt, Oleg Mayba, Florian Gnad, Jin-Feng Liu, Gregoire Pau ...Show all 30 authors... , Jens Reeder, Yi Cao, Kiran Mukhyala, Suresh K. Selvaraj, Ma-Mie Yu, Gregory J. Zynda, Matthew J. Brauer, Thomas D. Wu, Robert Clifford Gentleman, Gerard Manning, Robert L. Yauch, Richard Bourgon, David Stokoe, Zora Modrusan, Richard M. Neve, Frederic J. de Sauvage, Jeffrey Settleman, Somasekar Seshagiri, Ze-Min Zhang; Show fewer authors
A comprehensive transcriptional portrait of human cancer cell lines.
Nat. Biotechnol. 33:306-312(2015)

PubMed=25877200; DOI=10.1038/nature14397
Ma-Mie Yu, Suresh K. Selvaraj, May M.Y. Liang-Chu, Sahar Aghajani, Matthew Busse, Jean Yuan, Genee Lee, Franklin V. Peale, Christiaan Klijn, Richard Bourgon, Joshua S. Kaminker, Richard M. Neve;
A resource for cell line authentication, annotation and quality control.
Nature 520:307-311(2015)

PubMed=26405815; DOI=10.1371/journal.pone.0138210; PMCID=PMC4583389
Brian J. Capaldo, Devin Grimm Roller, Mark J. Axelrod, Alexander F. Koeppel, Emanuel F. Petricoin 3rd, Craig L. Slingluff Jr., Michael J. Weber, Aaron J. Mackey, Daniel Gioeli, Stefan Bekiranov;
Systems analysis of adaptive responses to MAP kinase pathway blockade in BRAF mutant melanoma.
PLoS ONE 10:e0138210.1-e0138210.25(2015)

PubMed=26589293; DOI=10.1186/s13073-015-0240-5; PMCID=PMC4653878
Jelle Scholtalbers, Sebastian Boegel, Thomas Bukur, Marius Byl, Sebastian Goerges, Patrick Sorn, Martin Loewer, Ugur Sahin, John C. Castle;
TCLP: an online cancer cell line catalogue integrating HLA type, predicted neo-epitopes, virus and gene expression.
Genome Med. 7:118.1-118.7(2015)

PubMed=26673621; DOI=10.18632/oncotarget.6548; PMCID=PMC4823068
Devin Grimm Roller, Brian J. Capaldo, Stefan Bekiranov, Aaron J. Mackey, Mark Robert Conaway, Emanuel F. Petricoin 3rd, Daniel Gioeli, Michael J. Weber;
Combinatorial drug screening and molecular profiling reveal diverse mechanisms of intrinsic and adaptive resistance to BRAF inhibition in V600E BRAF mutant melanomas.
Oncotarget 7:2734-2753(2016)

PubMed=27397505; DOI=10.1016/j.cell.2016.06.017; PMCID=PMC4967469
Francesco Iorio, Theo A. Knijnenburg, Daniel J. Vis, Graham Robert Bignell, Michael Patrick Menden, Michael Schubert, Nanne Aben, Emanuel Goncalves, Syd Barthorpe, Howard Lightfoot, Thomas Cokelaer ...Show all 39 authors... , Patricia Greninger, Ewald van Dyk, Han Chang, Heshani de Silva, Holger Heyn, Xian-Ming Deng, Regina K. Egan, Qing-Song Liu, Tatiana Mironenko, Xeni Mitropoulos, Laura Richardson, Jin-Hua Wang, Ting-Hu Zhang, Sebastian Moran, Sergi Sayols, Maryam Soleimani, David Tamborero, Nuria Lopez-Bigas, Petra Ross-Macdonald, Manel Esteller, Nathanael S. Gray, Daniel Arie Haber, Michael Rudolf Stratton, Cyril Henri Benes, Lodewyk F.A. Wessels, Julio Saez-Rodriguez, Ultan McDermott, Mathew J. Garnett; Show fewer authors
A landscape of pharmacogenomic interactions in cancer.
Cell 166:740-754(2016)

PubMed=28196595; DOI=10.1016/j.ccell.2017.01.005; PMCID=PMC5501076
Jun Li, Wei Zhao, Rehan Akbani, Wen-Bin Liu, Zhen-Lin Ju, Shi-Yun Ling, Christopher P. Vellano, Paul Roebuck, Qing-Hua Yu, A. Karina Eterovic, Lauren Averett Byers ...Show all 25 authors... , Michael A. Davies, Wan-Leng Deng, Y.N. Vashisht Gopal, Guo Chen, Erika Maria von Euw, Dennis Joseph Slamon, Dylan Conklin, John Victor Heymach, Adi F. Gazdar, John D. Minna, Jeffrey N. Myers, Yi-Ling Lu, Gordon B. Mills, Han Liang; Show fewer authors
Characterization of human cancer cell lines by reverse-phase protein arrays.
Cancer Cell 31:225-239(2017)

PubMed=29275043; DOI=10.1016/j.jprot.2017.12.013
Tarcisio Liberato, Dayelle S. Pessotti, Isabella Fukushima, Eduardo S. Kitano, Solange M.T. Serrano, Andre Zelanis;
Signatures of protein expression revealed by secretome analyses of cancer associated fibroblasts and melanoma cell lines.
J. Proteomics 174:1-8(2018)

PubMed=29492214; DOI=10.18632/oncotarget.23989; PMCID=PMC5823576
Maria Cristina Sini, Valentina Doneddu, Panagiotis Paliogiannis, Milena Casula, Maria Colombino, Antonella Manca, Gerardo Botti, Paolo Antonio Ascierto, Amelia Lissia, Antonio Cossu, Giuseppe Palmieri;
Genetic alterations in main candidate genes during melanoma progression.
Oncotarget 9:8531-8541(2018)

PubMed=29605720; DOI=10.1016/j.neo.2018.02.009; PMCID=PMC5915992
Luca Mologni, Mariantonia Costanza, Geeta Geeta Sharma, Michela Viltadi, Luca Massimino, Stefania Citterio, Stefania Purgante, Hima Raman, Alessandra Pirola, Massimo Zucchetti, Rocco Piazza, Carlo Gambacorti-Passerini;
Concomitant BCORL1 and BRAF mutations in vemurafenib-resistant melanoma cells.
Neoplasia 20:467-477(2018)

PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747; PMCID=PMC6445675
Julie Dutil, Zhi-Hua Chen, Alvaro N.A. Monteiro, Jamie K. Teer, Steven A. Eschrich;
An interactive resource to probe genetic diversity and estimated ancestry in cancer cell lines.
Cancer Res. 79:1263-1273(2019)

PubMed=30971826; DOI=10.1038/s41586-019-1103-9
Fiona M. Behan, Francesco Iorio, Gabriele Picco, Emanuel Goncalves, Charlotte M. Beaver, Giorgia Migliardi, Rita Santos, Yanhua Rao, Francesco Sassi, Marika Pinnelli, Rizwan Ansari ...Show all 25 authors... , Sarah Harper, David Adam Jackson, Rebecca McRae, Rachel Pooley, Piers Wilkinson, Dieudonne J. van der Meer, David Dow, Carolyn A. Buser-Doepner, Andrea Bertotti, Livio Trusolino, Euan Alexander Stronach, Julio Saez-Rodriguez, Kosuke Yusa, Mathew J. Garnett; Show fewer authors
Prioritization of cancer therapeutic targets using CRISPR-Cas9 screens.
Nature 568:511-516(2019)

PubMed=31068700; DOI=10.1038/s41586-019-1186-3; PMCID=PMC6697103
Mahmoud Ghandi, Franklin W. Huang, Judit Jane-Valbuena, Gregory V. Kryukov, Christopher C. Lo, E. Robert McDonald 3rd, Jordi Ginesta Barretina, Ellen T. Gelfand, Craig M. Bielski, Hao-Xin Li, Kevin Hu ...Show all 68 authors... , Alexander Y. Andreev-Drakhlin, Jaegil Kim, Julian M. Hess, Brian J. Haas, Francois Aguet, Barbara A. Weir, Michael V. Rothberg, Brenton R. Paolella, Michael Scott Lawrence, Rehan Akbani, Yi-Ling Lu, Hong L. Tiv, Prafulla C. Gokhale, Antoine de Weck, Ali Amin Mansour, Coyin Oh, Juliann Shih, Kevin Hadi, Yanay Rosen, Jonathan Bistline, Kavitha Venkatesan, Anupama Reddy, Dmitriy Sonkin, Manway Liu, Joseph Lehar, Joshua M. Korn, Dale A. Porter, Michael D. Jones, Javad Golji, Giordano Caponigro, Jordan E. Taylor, Caitlin M. Dunning, Amanda L. Creech, Allison C. Warren, James M. McFarland, Mahdi Zamanighomi, Audrey Kauffmann, Nicolas Stransky, Marcin Imielinski, Yosef E. Maruvka, Andrew D. Cherniack, Aviad Tsherniak, Francisca Vazquez, Jacob D. Jaffe, Andrew Alan Lane, David M. Weinstock, Cory M. Johannessen, Michael P. Morrissey, Frank Stegmeier, Robert Schlegel, William Chun Hahn, Gad Getz, Gordon B. Mills, Jesse S. Boehm, Todd Robert Golub, Levi Alexander Garraway, William Raj Sellers; Show fewer authors
Next-generation characterization of the Cancer Cell Line Encyclopedia.
Nature 569:503-508(2019)

PubMed=31978347; DOI=10.1016/j.cell.2019.12.023; PMCID=PMC7339254
David Paul Nusinow, John Szpyt, Mahmoud Ghandi, Christopher M. Rose, E. Robert McDonald 3rd, Marian Kalocsay, Judit Jane-Valbuena, Ellen T. Gelfand, Devin K. Schweppe, Mark P. Jedrychowski, Javad Golji ...Show all 20 authors... , Dale A. Porter, Tomas Rejtar, Y. Karen Wang, Gregory V. Kryukov, Frank Stegmeier, Brian K. Erickson, Levi Alexander Garraway, William Raj Sellers, Steven P. Gygi; Show fewer authors
Quantitative proteomics of the Cancer Cell Line Encyclopedia.
Cell 180:387-402.e16(2020)

PubMed=35128241; DOI=10.1021/acsomega.1c05361; PMCID=PMC8811929
Ramon Martinez 3rd, Wei-Liang Huang, Heather Buck, Samantha Rea, Amy E. Defnet, Maureen A. Kane, Paul Shapiro;
Proteomic changes in the monolayer and spheroid melanoma cell models of acquired resistance to BRAF and MEK1/2 inhibitors.
ACS Omega 7:3293-3311(2022)

PubMed=35839778; DOI=10.1016/j.ccell.2022.06.010; PMCID=PMC9387775
Emanuel Goncalves, Rebecca C. Poulos, Zhao-Xiang Cai, Syd Barthorpe, Srikanth S. Manda, Natasha Lucas, Alexandra Beck, Daniel Bucio-Noble, Michael Dausmann, Caitlin Hall, Michael Hecker ...Show all 32 authors... , Jennifer Koh, Howard Lightfoot, Sadia Mahboob, Iman Mali, James Morris, Laura Richardson, Akila J. Seneviratne, Rebecca Shepherd, Erin Sykes, Frances Thomas, Sara Valentini, Steven G. Williams, Yang-Xiu Wu, Dylan Xavier, Karen L. MacKenzie, Peter G. Hains, Brett Tully, Phillip James Robinson, Qing Zhong, Mathew J. Garnett, Roger Robert Reddel; Show fewer authors
Pan-cancer proteomic map of 949 human cell lines.
Cancer Cell 40:835-849.e8(2022)

Cross-references
Cell line collections (Providers) Abcam; ab275461
AddexBio; C0020004/4992
ATCC; CRL-1619
ATCC; CRL-7904 - Discontinued
BCRC; 60039
BCRJ; 0278
CCTCC; GDC0285
CCTCC; GDC0314
CLS; 300110
ECACC; 88113005
IBRC; C10141
IZSLER; BS TCL 88
KCB; KCB 99003YJ
NCBI_Iran; C136
Ubigene; YC-C036
Cell line databases/resources CLO; CLO_0001544
CLO; CLO_0001581
CLO; CLO_0001582
MCCL; MCC:0000024
CLDB; cl198
CLDB; cl199
cancercelllines; CVCL_0132
CCRID; 1101HUM-PUMC000126
CCRID; 1101HUM-PUMC000327
CCRID; 3101HUMSCSP533
CCRID; 3101HUMTCHu155
CCRID; 4201HUM-CCTCC00285
Cell_Model_Passport; SIDM00795
CGH-DB; 9313-4
Cosmic-CLP; 906793
DepMap; ACH-000219
IGRhCellID; A375
LINCS_HMS; 50060
LINCS_LDP; LCL-1235
Lonza; 970
Anatomy/cell type resources BTO; BTO_0002806
Biological sample resources BioSample; SAMN03472142
BioSample; SAMN05292441
BioSample; SAMN07709998
BioSample; SAMN07709999
BioSample; SAMN07710000
BioSample; SAMN07710001
BioSample; SAMN07710002
BioSample; SAMN07710003
BioSample; SAMN07710004
BioSample; SAMN10988347
ENCODE; ENCBS606AAA
ENCODE; ENCBS607AAA
CRISP screens repositories BioGRID_ORCS_Cell_line; 44
Chemistry resources ChEMBL-Cells; CHEMBL3308077
ChEMBL-Targets; CHEMBL613859
GDSC; 906793
PharmacoDB; A375_42_2019
PubChem_Cell_line; CVCL_0132
Encyclopedic resources Wikidata; Q54605986
Experimental variables resources EFO; EFO_0002103
Gene expression databases ArrayExpress; E-MTAB-38
ArrayExpress; E-MTAB-783
ArrayExpress; E-MTAB-2706
ArrayExpress; E-MTAB-2770
ArrayExpress; E-MTAB-3610
GEO; GSM206443
GEO; GSM218051
GEO; GSM274681
GEO; GSM276771
GEO; GSM555121
GEO; GSM555173
GEO; GSM827158
GEO; GSM886854
GEO; GSM887919
GEO; GSM952580
GEO; GSM1092559
GEO; GSM1138787
GEO; GSM1177892
GEO; GSM1177893
GEO; GSM1374382
GEO; GSM1669582
GEO; GSM1671962
GEO; GSM1671967
GEO; GSM1671977
GEO; GSM1671981
GEO; GSM1671982
GEO; GSM1671987
GEO; GSM1671990
GEO; GSM1672001
GEO; GSM1672004
GEO; GSM1672007
GEO; GSM1672011
GEO; GSM1672017
GEO; GSM1672024
GEO; GSM1672027
GEO; GSM1672030
GEO; GSM1672039
GEO; GSM1672051
GEO; GSM1672062
GEO; GSM1672067
GEO; GSM1672078
GEO; GSM1672097
GEO; GSM1672102
GEO; GSM1672119
GEO; GSM1672135
GEO; GSM3039510
GEO; GSM3039516
GEO; GSM3039517
GEO; GSM3039518
Polymorphism and mutation databases Cosmic; 686480
Cosmic; 687431
Cosmic; 706114
Cosmic; 876698
Cosmic; 888861
Cosmic; 897482
Cosmic; 897735
Cosmic; 905226
Cosmic; 906793
Cosmic; 928688
Cosmic; 933003
Cosmic; 1006556
Cosmic; 1022280
Cosmic; 1054855
Cosmic; 1132587
Cosmic; 1155278
Cosmic; 1211162
Cosmic; 1303032
Cosmic; 1458961
Cosmic; 1459655
Cosmic; 1477406
Cosmic; 1481413
Cosmic; 1507620
Cosmic; 1537486
Cosmic; 1555009
Cosmic; 1669118
Cosmic; 1812178
Cosmic; 1888914
Cosmic; 1890486
Cosmic; 1989294
Cosmic; 1995332
Cosmic; 2036699
Cosmic; 2230112
Cosmic; 2233660
Cosmic; 2479252
Cosmic; 2791113
IARC_TP53; 21163
LiGeA; CCLE_226
Progenetix; CVCL_0132
Proteomic databases PRIDE; PXD001485
PRIDE; PXD004343
PRIDE; PXD005912
PRIDE; PXD007265
PRIDE; PXD021877
PRIDE; PXD022992
PRIDE; PXD025255
PRIDE; PXD025881
PRIDE; PXD026952
PRIDE; PXD027886
PRIDE; PXD028863
PRIDE; PXD030304
Sequence databases EGA; EGAS00001000610
EGA; EGAS00001000978
EGA; EGAS00001002554
Entry history
Entry creation04-Apr-2012
Last entry update10-Apr-2025
Version number49