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Cellosaurus 22Rv1 (CVCL_1045)

[Text version]
Cell line name 22Rv1
Synonyms 22RV1; 22Rv-1; 22rV1; CWR-22rv1; CWR22-Rv1; CWR22R-V1; CWR22-R1; CWR22Rv1; CWR22R
Accession CVCL_1045
Resource Identification Initiative To cite this cell line use: 22Rv1 (RRID:CVCL_1045)
Comments Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Part of: COSMIC cell lines project.
Part of: TCGA-110-CL cell line panel.
Population: Caucasian.
Virology: Contains at least 10 integrated copies of xenotropic murine leukemia virus-related virus (XMRV) genome and produces a high titer of the virus (PubMed=19403664; PubMed=30629668).
Doubling time: ~49 hours (PubMed=10462204); 55 hours (PubMed=25984343); 63 hours (Note=From cell counting), 94 hours (Note=From absorbance) (DOI=10.5897/IJBMBR2013.0154); ~40 hours (ATCC=CRL-2505); 40-60 hours (DSMZ=ACC-438); ~41 hours (PBCF); 24.07 hours (JWGray panel).
Microsatellite instability: Instable (MSI-high) (PubMed=23671654; PubMed=31068700; Sanger).
Omics: Genomics; DNA methylation analysis.
Omics: Genomics; Whole exome sequencing.
Omics: Phenotyping; CRISPR screening.
Omics: Phenotyping; Drug screening.
Omics: Phenotyping; shRNA library screening.
Omics: Proteomics; Quantitative.
Omics: Transcriptomics; Microarray.
Omics: Transcriptomics; RNAseq.
Omics: Variations; Array-based CGH.
Omics: Variations; SNP array analysis.
Derived from site: In situ; Prostate; UBERON=UBERON_0002367.
Sequence variations
  • Mutation; HGNC; HGNC:1097; BRAF; Simple; p.Leu597Arg (c.1790T>G); ClinVar=VCV000013968; Zygosity=Heterozygous (DepMap=ACH-000956).
  • Mutation; HGNC; HGNC:7133; KMT2D; Simple; p.Arg1252Ter (c.3754C>T); ClinVar=VCV000167228; Zygosity=Heterozygous (Cosmic-CLP=924100; DepMap=ACH-000956).
  • Mutation; HGNC; HGNC:7133; KMT2D; Simple; p.Gln3158Ter (c.9472C>T); Zygosity=Heterozygous (Cosmic-CLP=924100; DepMap=ACH-000956).
  • Mutation; HGNC; HGNC:8975; PIK3CA; Simple; p.Gln546Arg (c.1637A>G); ClinVar=VCV000045466; Zygosity=Heterozygous (Cosmic-CLP=924100; DepMap=ACH-000956).
  • Mutation; HGNC; HGNC:11998; TP53; Simple; p.Gln331Arg (c.992A>G); ClinVar=VCV000421319; Zygosity=Heterozygous (PubMed=14518029; ATCC=CRL-2505; Cosmic-CLP=924100; DepMap=ACH-000956).
Genome ancestry Source: PubMed=30894373

Origin% genome
African0.89
Native American0.23
East Asian, North0.52
East Asian, South0
South Asian0.27
European, North67.46
European, South30.62
Disease Prostate carcinoma (NCIt: C4863)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Parent: CVCL_3967 (CWR22)
Children:
CVCL_E8SC (22Rv1 CHD7 KO clone 2A2)CVCL_E8SD (22Rv1-CHD7 KO clone 1C2)CVCL_4Y35 (22Rv1 R)
CVCL_A6PG (22Rv1-CabR1)CVCL_A6PH (22Rv1-CabR2)CVCL_C8WA (22RV1-EGFP)
CVCL_C8UT (22RV1-Luc)CVCL_WZ28 (22Rv1-SL)CVCL_ZC64 (22Rv1-undup1)
CVCL_ZC65 (22Rv1-undup2)CVCL_ZC66 (22Rv1-undup3)CVCL_RS39 (22RV1rYM155_300nM)
CVCL_KS53 (CellSensor Gli-bla 22Rv1)CVCL_WK44 (CWR22Rv1-AR-EK)CVCL_D6A1 (HyCyte 22Rv1 KO-hFOXA1)
CVCL_D6A2 (HyCyte 22Rv1 KO-hPTEN)CVCL_E3GG (HyCyte 22Rv1-Luc)CVCL_D7FW (Ubigene 22Rv1 ATM KO)
CVCL_D7FX (Ubigene 22Rv1 NQO1 KO)CVCL_D7FY (Ubigene 22Rv1 PRDX5 KO)CVCL_D7FZ (Ubigene 22Rv1 ZBTB33 KO)
Sex of cell Male
Age at sampling Adult
Category Cancer cell line
STR profile Source(s): ATCC=CRL-2505; CLS=305037; Cosmic-CLP=924100; DSMZ=ACC-438; ECACC=05092802; PubMed=14518029; PubMed=25877200; PubMed=27271795; PubMed=31006810; Technion Genomics Center

Markers:
AmelogeninX,Y
CSF1PO10,11
D1S165617,18,19
D2S44111,12
D2S133817,18
D3S135814,15 (PubMed=14518029)
15 (CLS=305037; DSMZ=ACC-438; PubMed=25877200; PubMed=27271795; Technion Genomics Center)
D5S81811,12 (Cosmic-CLP=924100; ECACC=05092802; PubMed=31006810)
11,12,13 (ATCC=CRL-2505; DSMZ=ACC-438; PubMed=14518029; Technion Genomics Center)
11,13 (CLS=305037; PubMed=25877200; PubMed=27271795)
D6S104316
D7S8209,10,11 (ATCC=CRL-2505; CLS=305037; DSMZ=ACC-438; PubMed=25877200; PubMed=27271795; Technion Genomics Center)
10,11 (Cosmic-CLP=924100; ECACC=05092802; PubMed=14518029; PubMed=31006810)
D8S117912,13,14 (ATCC=CRL-2505; DSMZ=ACC-438; PubMed=14518029; PubMed=27271795; Technion Genomics Center)
13,14 (CLS=305037; PubMed=25877200)
D10S124813,14,15
D12S39118,25
D13S3178,9,12 (PubMed=14518029)
9,12 (CLS=305037; DSMZ=ACC-438; PubMed=25877200; PubMed=27271795; PubMed=31006810; Technion Genomics Center)
D16S53912
D18S5113,14
D19S43313,14
D21S1130
D22S104515
DYS39111
FGA19,23 (CLS=305037)
20,23 (ATCC=CRL-2505; DSMZ=ACC-438; PubMed=25877200; PubMed=27271795; Technion Genomics Center)
Penta D9,12
Penta E5,13
TH016,9.3
TPOX8
vWA14,15,20,21 (DSMZ=ACC-438)
15,20,21 (PubMed=14518029)
15,21 (ATCC=CRL-2505; CLS=305037; Cosmic-CLP=924100; ECACC=05092802; PubMed=25877200; PubMed=27271795; PubMed=31006810; Technion Genomics Center)

Run an STR similarity search on this cell line
Web pages Info; CaP CLDb; -; https://web.archive.org/web/20160703200709/http://capcelllines.ca:80/details.asp?id=53
Info; Synapse; PS-ON; https://www.synapse.org/#!Synapse:syn31544528
Info; Thermo Fisher; -; https://www.thermofisher.com/ch/en/home/technical-resources/cell-lines/c/cell-lines-detail-524.html
Publications

PubMed=10462204; DOI=10.1007/s11626-999-0115-4
R. Michael Sramkoski, Thomas G. Pretlow 2nd, Joseph M. Giaconia, Theresa P. Pretlow, Stuart Schwartz, Man-Sun Sy, Susan Ruth Marengo, Johng Sik Rhim, De-Sheng Zhang, James W. Jacobberger;
A new human prostate carcinoma cell line, 22Rv1.
In Vitro Cell. Dev. Biol. Anim. 35:403-409(1999)

PubMed=12725112; DOI=10.1385/1-59259-372-0:21
Pamela J. Russell, Elizabeth A. Kingsley;
Human prostate cancer cell lines.
Methods Mol. Med. 81:21-39(2003)

PubMed=14518029; DOI=10.1002/pros.10290
Adrie van Bokhoven, Marileila Varella-Garcia, Christopher T. Korch, Widya U. Johannes, E. Erin Smith, Heidi L. Miller, Steven K. Nordeen, Gary J. Miller, M. Scott Lucia;
Molecular characterization of human prostate carcinoma cell lines.
Prostate 57:205-225(2003)

PubMed=14518030; DOI=10.1002/pros.10291
Adrie van Bokhoven, Aimee Caires, Michael Di Maria, Aline Passarini Schulte, M. Scott Lucia, Steven K. Nordeen, Gary J. Miller, Marileila Varella-Garcia;
Spectral karyotype (SKY) analysis of human prostate carcinoma cell lines.
Prostate 57:226-244(2003)

CLPUB00698
Adrie van Bokhoven;
Models for prostate cancer. Molecular characterization and critical appraisal of human prostate carcinoma cell lines.
Thesis PhD (2004); Katholieke Universiteit Nijmegen; Nijmegen; Netherlands

PubMed=15486987; DOI=10.1002/pros.20158
Hong-Juan Zhao, Young Kim, Pei Wang, Jacques Lapointe, Robert Tibshirani, Jonathan R. Pollack, James D. Brooks;
Genome-wide characterization of gene expression variations and DNA copy number changes in prostate cancer cell lines.
Prostate 63:187-197(2005)

PubMed=19403664; DOI=10.1128/JVI.00546-09; PMCID=PMC2704771
Emily C. Knouf, Michael J. Metzger, Patrick S. Mitchell, Jason D. Arroyo, John Richard Chevillet, Muneesh Tewari, Arthur Dusty Miller;
Multiple integrated copies and high-level production of the human retrovirus XMRV (xenotropic murine leukemia virus-related virus) from 22Rv1 prostate carcinoma cells.
J. Virol. 83:7353-7356(2009)

PubMed=20164919; DOI=10.1038/nature08768; PMCID=PMC3145113
Graham Robert Bignell, Christopher D. Greenman, Helen R. Davies, Adam P. Butler, Sarah Edkins, Jenny M. Andrews, Gemma Buck, Lina Chen, David Beare, Calli Latimer, Sara Widaa ...Show all 22 authors... , Jonathan Hinton, Ciara Fahey, Bei-Yuan Fu, Sajani Swamy, Gillian L. Dalgliesh, Bin Tean Teh, Panos Deloukas, Feng-Tang Yang, Peter J. Campbell, P. Andrew Futreal, Michael Rudolf Stratton; Show fewer authors
Signatures of mutation and selection in the cancer genome.
Nature 463:893-898(2010)

PubMed=20215515; DOI=10.1158/0008-5472.CAN-09-3458; PMCID=PMC2881662
S. Michael Rothenberg, Gayatry Mohapatra, Miguel N. Rivera, Daniel Winokur, Patricia Greninger, Mai Nitta, Peter M. Sadow, Gaya Sooriyakumar, Brian W. Brannigan, Matthew J. Ulman, Rushika M. Perera ...Show all 22 authors... , Rui Wang, Angela Tam, Xiao-Jun Ma, Mark Erlander, Dennis C. Sgroi, James W. Rocco, Mark W. Lingen, Ezra E.W. Cohen, David Neil Louis, Jeffrey Settleman, Daniel Arie Haber; Show fewer authors
A genome-wide screen for microdeletions reveals disruption of polarity complex genes in diverse human cancers.
Cancer Res. 70:2158-2164(2010)

PubMed=21248069; DOI=10.1158/0008-5472.CAN-10-1998; PMCID=PMC3059379
Ying-Ming Li, Majid Alsagabi, Dan-Hua Fan, G. Steven Bova, Ahmed H. Tewfik, Scott M. Dehm;
Intragenic rearrangement and altered RNA splicing of the androgen receptor in a cell-based model of prostate cancer progression.
Cancer Res. 71:2108-2117(2011)

PubMed=22460905; DOI=10.1038/nature11003; PMCID=PMC3320027
Jordi Ginesta Barretina, Giordano Caponigro, Nicolas Stransky, Kavitha Venkatesan, Adam A. Margolin, Sungjoon Kim, Christopher J. Wilson, Joseph Lehar, Gregory V. Kryukov, Dmitriy Sonkin, Anupama Reddy ...Show all 61 authors... , Manway Liu, Lauren Murray, Michael F. Berger, John E. Monahan, Paula Morais, Jodi Meltzer, Adam Korejwa, Judit Jane-Valbuena, Felipa A. Mapa, Joseph Thibault, Eva Bric-Furlong, Pichai Raman, Aaron Shipway, Ingo H. Engels, Jill Cheng, Guo-Ying K. Yu, Jian-Jun Yu, Peter Aspesi Jr., Melanie de Silva, Kalpana Jagtap, Michael D. Jones, Li Wang, Charles Hatton, Emanuele Palescandolo, Supriya Gupta, Scott Mahan, Carrie Sougnez, Robert C. Onofrio, Ted Liefeld, Laura E. MacConaill, Wendy Winckler, Michael Reich, Nan-Xin Li, Jill P. Mesirov, Stacey B. Gabriel, Gad Getz, Kristin Ardlie, Vivien Chan, Vic E. Myer, Barbara L. Weber, Jeff Porter, Markus Warmuth, Peter Finan, Jennifer L. Harris, Matthew Langer Meyerson, Todd Robert Golub, Michael P. Morrissey, William Raj Sellers, Robert Schlegel, Levi Alexander Garraway; Show fewer authors
The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity.
Nature 483:603-607(2012)

DOI=10.5897/IJBMBR2013.0154
Simon Bernard Iloki Assanga, Armida Andrea Gil-Salido, Lydianis Maria Lewis Lujan, Aaron de Jesus Rosas-Durazo, Ana Lilian Acosta-Silva, Elba Griselda Rivera-Castaneda, Jose Luis Rubio-Pino;
Cell growth curves for different cell lines and their relationship with biological activities.
Int. J. Biotechnol. Mol. Biol. Res. 4:60-70(2013)

PubMed=23117885; DOI=10.1158/0008-5472.CAN-12-3630; PMCID=PMC3549016
Ying-Ming Li, Siu-Chiu Chan, Lucas J. Brand, Tae Hyun Hwang, Kevin A.T. Silverstein, Scott M. Dehm;
Androgen receptor splice variants mediate enzalutamide resistance in castration-resistant prostate cancer cell lines.
Cancer Res. 73:483-489(2013)

PubMed=23671654; DOI=10.1371/journal.pone.0063056; PMCID=PMC3646030
Yu-Heng Lu, T. David Soong, Olivier Elemento;
A novel approach for characterizing microsatellite instability in cancer cells.
PLoS ONE 8:e63056.1-e63056.10(2013)

PubMed=25984343; DOI=10.1038/sdata.2014.35; PMCID=PMC4432652
Glenn S. Cowley, Barbara A. Weir, Francisca Vazquez, Pablo Tamayo, Justine A. Scott, Scott Rusin, Alexandra East-Seletsky, Levi D. Ali, William F.J. Gerath, Sarah E. Pantel, Patrick Hall Lizotte ...Show all 40 authors... , Guo-Zhi Jiang, Jessica Hsiao, Aviad Tsherniak, Elizabeth Dwinell, Simon Aoyama, Michael Okamoto, William Harrington, Ellen T. Gelfand, Thomas M. Green, Mark J. Tomko, Shuba Gopal, Terence C. Wong, Hu-Bo Li, Sara Howell, Nicolas Stransky, Ted Liefeld, Dongkeun Jang, Jonathan Bistline, Barbara Hill Meyers, Scott Allen Armstrong, Kenneth Carl Anderson, Kimberly Stegmaier, Michael Reich, David Pellman, Jesse S. Boehm, Jill P. Mesirov, Todd Robert Golub, David E. Root, William Chun Hahn; Show fewer authors
Parallel genome-scale loss of function screens in 216 cancer cell lines for the identification of context-specific genetic dependencies.
Sci. Data 1:140035.1-140035.12(2014)

PubMed=25877200; DOI=10.1038/nature14397
Ma-Mie Yu, Suresh K. Selvaraj, May M.Y. Liang-Chu, Sahar Aghajani, Matthew Busse, Jean Yuan, Genee Lee, Franklin V. Peale, Christiaan Klijn, Richard Bourgon, Joshua S. Kaminker, Richard M. Neve;
A resource for cell line authentication, annotation and quality control.
Nature 520:307-311(2015)

PubMed=27271795; DOI=10.1002/pros.23190
Mojgan Shourideh, Adam DePriest, James Larue Mohler, Elizabeth M. Wilson, Shahriar Koochekpour;
Characterization of fibroblast-free CWR-R1ca castration-recurrent prostate cancer cell line.
Prostate 76:1067-1077(2016)

PubMed=27397505; DOI=10.1016/j.cell.2016.06.017; PMCID=PMC4967469
Francesco Iorio, Theo A. Knijnenburg, Daniel J. Vis, Graham Robert Bignell, Michael Patrick Menden, Michael Schubert, Nanne Aben, Emanuel Goncalves, Syd Barthorpe, Howard Lightfoot, Thomas Cokelaer ...Show all 39 authors... , Patricia Greninger, Ewald van Dyk, Han Chang, Heshani de Silva, Holger Heyn, Xian-Ming Deng, Regina K. Egan, Qing-Song Liu, Tatiana Mironenko, Xeni Mitropoulos, Laura Richardson, Jin-Hua Wang, Ting-Hu Zhang, Sebastian Moran, Sergi Sayols, Maryam Soleimani, David Tamborero, Nuria Lopez-Bigas, Petra Ross-Macdonald, Manel Esteller, Nathanael S. Gray, Daniel Arie Haber, Michael Rudolf Stratton, Cyril Henri Benes, Lodewyk F.A. Wessels, Julio Saez-Rodriguez, Ultan McDermott, Mathew J. Garnett; Show fewer authors
A landscape of pharmacogenomic interactions in cancer.
Cell 166:740-754(2016)

PubMed=28145883; DOI=10.18632/oncotarget.14850; PMCID=PMC5386661
Mannan Nouri, Josselin Caradec, Amy Anne Lubik, Na Li, Brett G. Hollier, Mandeep Takhar, Manuel Altimirano-Dimas, Meng-Qian Chen, Mani Roshan-Moniri, Miriam Butler, Melanie Lehman ...Show all 27 authors... , Jennifer L. Bishop, Sarah Truong, Shih-Chieh Huang, Dawn R. Cochrane, Michael Cox, Catherine Collins, Martin E. Gleave, Nicholas Erho, Mohamed Alshalafa, Elai Davicioni, Colleen Nelson, Cheryl Y. Gregory-Evans, R. Jeffrey Karnes, Robert Brian Jenkins, Eric A. Klein, Ralph Buttyan; Show fewer authors
Therapy-induced developmental reprogramming of prostate cancer cells and acquired therapy resistance.
Oncotarget 8:18949-18967(2017)

PubMed=28928128; DOI=10.1158/0008-5472.CAN-17-0320; PMCID=PMC5654612
Jamie L. Van Etten, Michael D. Nyquist, Ying-Ming Li, Ren-Dong Yang, Yeung Ho, Rachel Johnson, Olivia Ondigi, Daniel F. Voytas, Christine Henzler, Scott M. Dehm;
Targeting a single alternative polyadenylation site coordinately blocks expression of androgen receptor mRNA splice variants in prostate cancer.
Cancer Res. 77:5228-5235(2017)

PubMed=30629668; DOI=10.1371/journal.pone.0210404; PMCID=PMC6328144
Cord C. Uphoff, Claudia Pommerenke, Sabine A. Denkmann, Hans Gunther Drexler;
Screening human cell lines for viral infections applying RNA-Seq data analysis.
PLoS ONE 14:e0210404.1-e0210404.22(2019)

PubMed=30787054; DOI=10.1158/1055-9965.EPI-18-1132; PMCID=PMC6548687
Stanley Eugene Hooker Jr., Leanne Woods-Burnham, Madhavi Bathina, Stacy Lloyd, Priyatham Gorjala, Ranjana Mitra, Larisa Nonn, K. Sean Kimbro, Rick Antonius Kittles;
Genetic ancestry analysis reveals misclassification of commonly used cancer cell lines.
Cancer Epidemiol. Biomarkers Prev. 28:1003-1009(2019)

PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747; PMCID=PMC6445675
Julie Dutil, Zhi-Hua Chen, Alvaro N.A. Monteiro, Jamie K. Teer, Steven A. Eschrich;
An interactive resource to probe genetic diversity and estimated ancestry in cancer cell lines.
Cancer Res. 79:1263-1273(2019)

PubMed=30971826; DOI=10.1038/s41586-019-1103-9
Fiona M. Behan, Francesco Iorio, Gabriele Picco, Emanuel Goncalves, Charlotte M. Beaver, Giorgia Migliardi, Rita Santos, Yanhua Rao, Francesco Sassi, Marika Pinnelli, Rizwan Ansari ...Show all 25 authors... , Sarah Harper, David Adam Jackson, Rebecca McRae, Rachel Pooley, Piers Wilkinson, Dieudonne J. van der Meer, David Dow, Carolyn A. Buser-Doepner, Andrea Bertotti, Livio Trusolino, Euan Alexander Stronach, Julio Saez-Rodriguez, Kosuke Yusa, Mathew J. Garnett; Show fewer authors
Prioritization of cancer therapeutic targets using CRISPR-Cas9 screens.
Nature 568:511-516(2019)

PubMed=31006810; DOI=10.1093/nar/gkz286; PMCID=PMC6582326
Evangelia Kounatidou, Sirintra Nakjang, Stuart R.C. McCracken, Scott M. Dehm, Craig N. Robson, Dominic Jones, Luke Gaughan;
A novel CRISPR-engineered prostate cancer cell line defines the AR-V transcriptome and identifies PARP inhibitor sensitivities.
Nucleic Acids Res. 47:5634-5647(2019)

PubMed=31068700; DOI=10.1038/s41586-019-1186-3; PMCID=PMC6697103
Mahmoud Ghandi, Franklin W. Huang, Judit Jane-Valbuena, Gregory V. Kryukov, Christopher C. Lo, E. Robert McDonald 3rd, Jordi Ginesta Barretina, Ellen T. Gelfand, Craig M. Bielski, Hao-Xin Li, Kevin Hu ...Show all 68 authors... , Alexander Y. Andreev-Drakhlin, Jaegil Kim, Julian M. Hess, Brian J. Haas, Francois Aguet, Barbara A. Weir, Michael V. Rothberg, Brenton R. Paolella, Michael Scott Lawrence, Rehan Akbani, Yi-Ling Lu, Hong L. Tiv, Prafulla C. Gokhale, Antoine de Weck, Ali Amin Mansour, Coyin Oh, Juliann Shih, Kevin Hadi, Yanay Rosen, Jonathan Bistline, Kavitha Venkatesan, Anupama Reddy, Dmitriy Sonkin, Manway Liu, Joseph Lehar, Joshua M. Korn, Dale A. Porter, Michael D. Jones, Javad Golji, Giordano Caponigro, Jordan E. Taylor, Caitlin M. Dunning, Amanda L. Creech, Allison C. Warren, James M. McFarland, Mahdi Zamanighomi, Audrey Kauffmann, Nicolas Stransky, Marcin Imielinski, Yosef E. Maruvka, Andrew D. Cherniack, Aviad Tsherniak, Francisca Vazquez, Jacob D. Jaffe, Andrew Alan Lane, David M. Weinstock, Cory M. Johannessen, Michael P. Morrissey, Frank Stegmeier, Robert Schlegel, William Chun Hahn, Gad Getz, Gordon B. Mills, Jesse S. Boehm, Todd Robert Golub, Levi Alexander Garraway, William Raj Sellers; Show fewer authors
Next-generation characterization of the Cancer Cell Line Encyclopedia.
Nature 569:503-508(2019)

PubMed=31395879; DOI=10.1038/s41467-019-11415-2; PMCID=PMC6687785
Katharine Yu, Bin Chen, Dvir Aran, Joe Charalel, Christina Yau, Douglas M. Wolf, Laura J. van 't Veer, Atul Janardhan Butte, Ted Goldstein, Marina Sirota;
Comprehensive transcriptomic analysis of cell lines as models of primary tumors across 22 tumor types.
Nat. Commun. 10:3574.1-3574.11(2019)

PubMed=31978347; DOI=10.1016/j.cell.2019.12.023; PMCID=PMC7339254
David Paul Nusinow, John Szpyt, Mahmoud Ghandi, Christopher M. Rose, E. Robert McDonald 3rd, Marian Kalocsay, Judit Jane-Valbuena, Ellen T. Gelfand, Devin K. Schweppe, Mark P. Jedrychowski, Javad Golji ...Show all 20 authors... , Dale A. Porter, Tomas Rejtar, Y. Karen Wang, Gregory V. Kryukov, Frank Stegmeier, Brian K. Erickson, Levi Alexander Garraway, William Raj Sellers, Steven P. Gygi; Show fewer authors
Quantitative proteomics of the Cancer Cell Line Encyclopedia.
Cell 180:387-402.e16(2020)

PubMed=35839778; DOI=10.1016/j.ccell.2022.06.010; PMCID=PMC9387775
Emanuel Goncalves, Rebecca C. Poulos, Zhao-Xiang Cai, Syd Barthorpe, Srikanth S. Manda, Natasha Lucas, Alexandra Beck, Daniel Bucio-Noble, Michael Dausmann, Caitlin Hall, Michael Hecker ...Show all 32 authors... , Jennifer Koh, Howard Lightfoot, Sadia Mahboob, Iman Mali, James Morris, Laura Richardson, Akila J. Seneviratne, Rebecca Shepherd, Erin Sykes, Frances Thomas, Sara Valentini, Steven G. Williams, Yang-Xiu Wu, Dylan Xavier, Karen L. MacKenzie, Peter G. Hains, Brett Tully, Phillip James Robinson, Qing Zhong, Mathew J. Garnett, Roger Robert Reddel; Show fewer authors
Pan-cancer proteomic map of 949 human cell lines.
Cancer Cell 40:835-849.e8(2022)

PubMed=38892296; DOI=10.3390/ijms25116111; PMCID=PMC11172770
Erica L. Beatson, Emily N. Risdon, Giulia C. Napoli, Douglas K. Price, Cindy H. Chau, William Douglas Figg Sr.;
Genomic characterization of preclinical prostate cancer cell line models.
Int. J. Mol. Sci. 25:6111.1-6111.19(2024)

Cross-references
Cell line collections (Providers) ATCC; CRL-2505
BCRC; 60545
CCTCC; GDC0288
CLS; 305037
DSMZ; ACC-438
ECACC; 05092802
KCB; KCB 200731YJ
Ubigene; YC-C012
Cell line databases/resources CLO; CLO_0001199
CLO; CLO_0001200
cancercelllines; CVCL_1045
CCRID; 3101HUMSCSP5022
CCRID; 3101HUMTCHu100
CCRID; 4201HUM-CCTCC00288
Cell_Model_Passport; SIDM00499
Cosmic-CLP; 924100
DepMap; ACH-000956
DSMZCellDive; ACC-438
IGRhCellID; 22Rv1
LINCS_LDP; LCL-1145
Lonza; 1442
Anatomy/cell type resources BTO; BTO_0002999
Biological sample resources BioSample; SAMN03471600
BioSample; SAMN03472052
BioSample; SAMN05292447
BioSample; SAMN07710012
BioSample; SAMN07710013
BioSample; SAMN07710014
BioSample; SAMN07710015
BioSample; SAMN07710016
BioSample; SAMN07710017
BioSample; SAMN07710018
BioSample; SAMN10988315
ENCODE; ENCBS070BKF
ENCODE; ENCBS383WOY
ENCODE; ENCBS596KKM
ENCODE; ENCBS626QQL
ENCODE; ENCBS737IZN
ENCODE; ENCBS822DIG
CRISP screens repositories BioGRID_ORCS_Cell_line; 821
Chemistry resources ChEMBL-Cells; CHEMBL3308004
ChEMBL-Targets; CHEMBL612657
GDSC; 924100
PharmacoDB; 22RV1_12_2019
PubChem_Cell_line; CVCL_1045
Encyclopedic resources Wikidata; Q54583380
Experimental variables resources EFO; EFO_0002095
Gene expression databases ArrayExpress; E-MTAB-38
ArrayExpress; E-MTAB-783
ArrayExpress; E-MTAB-2770
ArrayExpress; E-MTAB-3610
GEO; GSM91926
GEO; GSM525793
GEO; GSM648815
GEO; GSM827396
GEO; GSM886837
GEO; GSM887900
GEO; GSM1374375
GEO; GSM1633317
GEO; GSM1633318
GEO; GSM1633319
GEO; GSM1669565
GEO; GSM3145592
GEO; GSM3145703
Polymorphism and mutation databases Cosmic; 924100
Cosmic; 1028699
Cosmic; 1071480
Cosmic; 1075276
Cosmic; 1172629
Cosmic; 1330911
Cosmic; 1689707
Cosmic; 1995323
Cosmic; 2537791
Cosmic; 2580126
Cosmic; 2651766
Cosmic; 2669170
IARC_TP53; 18887
LiGeA; CCLE_229
Progenetix; CVCL_1045
Proteomic databases PRIDE; PXD030304
Sequence databases EGA; EGAS00001000978
Entry history
Entry creation04-Apr-2012
Last entry update14-Aug-2025
Version number51