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Cellosaurus GTL-16 (CVCL_7668)

[Text version]
Cell line name GTL-16
Synonyms GTL 16; GTL16
Accession CVCL_7668
Resource Identification Initiative To cite this cell line use: GTL-16 (RRID:CVCL_7668)
Comments Population: Japanese.
Characteristics: MET is amplified and overexpressed in this cell line.
Omics: Deep exome analysis.
Omics: SNP array analysis.
Omics: Transcriptome analysis by microarray.
Omics: Transcriptome analysis by RNAseq.
Derived from site: Metastatic; Liver; UBERON=UBERON_0002107.
Sequence variations
  • Mutation; HGNC; 11998; TP53; Simple; p.Arg110Cys (c.328C>T); ClinVar=VCV000142206; Zygosity=Heterozygous (from parent cell line).
HLA typing Source: PubMed=26589293
Class I
Class II
Disease Gastric adenocarcinoma (NCIt: C4004)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Parent: CVCL_0434 (MKN45)
CVCL_7696 (PR-GTL-16)
Sex of cell Female
Age at sampling 62Y
Category Cancer cell line

PubMed=2541345; DOI=10.1038/339155a0
Giordano S., Ponzetto C., Di Renzo M.F., Cooper C.S., Comoglio P.M.
Tyrosine kinase receptor indistinguishable from the c-met protein.
Nature 339:155-156(1989)

Ponzetto C., Giordano S., Peverali F., Della Valle G., Abate M.L., Vaula G., Comoglio P.M.
c-met is amplified but not mutated in a cell line with an activated met tyrosine kinase.
Oncogene 6:553-559(1991)

PubMed=1486568; DOI=10.1016/0165-4608(92)90350-H
Rege-Cambrin G., Scaravaglio P., Carozzi F., Giordano S., Ponzetto C., Comoglio P.M., Saglio G.
Karyotypic analysis of gastric carcinoma cell lines carrying an amplified c-met oncogene.
Cancer Genet. Cytogenet. 64:170-173(1992)

PubMed=22745804; DOI=10.1371/journal.pone.0039653
Lee N.V., Lira M.E., Pavlicek A., Ye J.-J., Buckman D., Bagrodia S., Srinivasa S.P., Zhao Y.-J., Aparicio S., Rejto P.A., Christensen J.G., Ching K.A.
A novel SND1-BRAF fusion confers resistance to c-Met inhibitor PF-04217903 in GTL16 cells through MAPK activation.
PLoS ONE 7:E39653-E39653(2012)

PubMed=24807215; DOI=10.1038/ncomms4830
Liu J.-F., McCleland M.L., Stawiski E.W., Gnad F., Mayba O., Haverty P.M., Durinck S., Chen Y.-J., Klijn C., Jhunjhunwala S., Lawrence M., Liu H.-B., Wan Y.-N., Chopra V.S., Yaylaoglu M.B., Yuan W.-L., Ha C., Gilbert H.N., Reeder J., Pau G., Stinson J., Stern H.M., Manning G., Wu T.D., Neve R.M., de Sauvage F.J., Modrusan Z., Seshagiri S., Firestein R., Zhang Z.-M.
Integrated exome and transcriptome sequencing reveals ZAK isoform usage in gastric cancer.
Nat. Commun. 5:3830.1-3830.8(2014)

PubMed=25485619; DOI=10.1038/nbt.3080
Klijn C., Durinck S., Stawiski E.W., Haverty P.M., Jiang Z.-S., Liu H.-B., Degenhardt J., Mayba O., Gnad F., Liu J.-F., Pau G., Reeder J., Cao Y., Mukhyala K., Selvaraj S.K., Yu M.-M., Zynda G.J., Brauer M.J., Wu T.D., Gentleman R.C., Manning G., Yauch R.L., Bourgon R., Stokoe D., Modrusan Z., Neve R.M., de Sauvage F.J., Settleman J., Seshagiri S., Zhang Z.-M.
A comprehensive transcriptional portrait of human cancer cell lines.
Nat. Biotechnol. 33:306-312(2015)

PubMed=26589293; DOI=10.1186/s13073-015-0240-5
Scholtalbers J., Boegel S., Bukur T., Byl M., Goerges S., Sorn P., Loewer M., Sahin U., Castle J.C.
TCLP: an online cancer cell line catalogue integrating HLA type, predicted neo-epitopes, virus and gene expression.
Genome Med. 7:118.1-118.7(2015)

Cell line databases/resources cancercelllines; CVCL_7668
Chemistry resources ChEMBL-Cells; CHEMBL3308698
ChEMBL-Targets; CHEMBL612708
PharmacoDB; GTL16_418_2019
PubChem_Cell_line; CVCL_7668
Encyclopedic resources Wikidata; Q54871835
Experimental variables resources EFO; EFO_0006578
Gene expression databases ArrayExpress; E-MTAB-2706
GEO; GSM685812
GEO; GSM686033
GEO; GSM686034
GEO; GSM843505
GEO; GSM1178098
GEO; GSM1178099
GEO; GSM1374485
GEO; GSM1374486
Polymorphism and mutation databases Cosmic; 755306
Cosmic; 755613
Cosmic; 887246
Cosmic; 1945868
Cosmic; 2069777
Cosmic; 2484973
Cosmic; 2807624
Progenetix; CVCL_7668
Sequence databases EGA; EGAS00001000610
Entry history
Entry creation04-Apr-2012
Last entry update05-Oct-2023
Version number29