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Cellosaurus LIM1215 (CVCL_2574)

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Cell line name LIM1215
Synonyms Lim1215; LIM 1215; LIM-1215
Accession CVCL_2574
Resource Identification Initiative To cite this cell line use: LIM1215 (RRID:CVCL_2574)
Comments Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Part of: COSMIC cell lines project.
From: Ludwig Institute for Cancer Research, Melbourne Branch; Melbourne; Australia.
Population: Caucasian.
Doubling time: 32 hours (Note=At 8th passage) (PubMed=3857372); 28 hours (PubMed=1427983); 29.52 hours (PubMed=25944804).
Microsatellite instability: Instable (MSI) (PubMed=19378335; PubMed=24755471; PubMed=25926053).
Omics: Genomics; Whole exome sequencing.
Omics: Glycomics; N-glycan profiling.
Omics: Phenotyping; Drug screening.
Omics: Proteomics; PTM; Phosphorylation; Quantitative.
Omics: Proteomics; Quantitative.
Omics: Transcriptomics; Microarray.
Omics: Transcriptomics; RNAseq.
Derived from site: Metastatic; Omentum; UBERON=UBERON_0003688.
Sequence variations
  • Mutation; HGNC; HGNC:173; ACVR2A; Simple; p.Pro423Gln (c.1268C>A); Zygosity=Heterozygous (PubMed=12615714).
  • Mutation; HGNC; HGNC:173; ACVR2A; Simple; p.Lys437Argfs*5 (c.1310delA); dbSNP=rs764719749; Zygosity=Heterozygous (PubMed=12615714).
  • Mutation; HGNC; HGNC:2514; CTNNB1; Simple; p.Thr41Ala (c.121A>G); ClinVar=VCV000017580; Zygosity=Homozygous (PubMed=24755471; Cosmic-CLP=2162949; DepMap=ACH-001546).
  • Mutation; HGNC; HGNC:11773; TGFBR2; Simple; p.Lys128Serfs*35 (c.383delA); ClinVar=VCV000477546; Zygosity=Homozygous (PubMed=12615714).
Genome ancestry Source: PubMed=30894373

Origin% genome
African5.72
Native American0
East Asian, North3.18
East Asian, South0
South Asian6.91
European, North26.95
European, South57.24
Disease Colon adenocarcinoma (NCIt: C4349)
Lynch syndrome (NCIt: C8494)
Lynch syndrome (ORDO: Orphanet_144)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Children:
CVCL_E7AP (LIM1215 IR)CVCL_LC77 (LIM1215 KRAS (G12A/+))CVCL_LC81 (LIM1215 KRAS (G12C/+))
CVCL_LC80 (LIM1215 KRAS (G12D/+))CVCL_LC76 (LIM1215 KRAS (G12R/+))CVCL_LC78 (LIM1215 KRAS (G12S/+))
CVCL_LC79 (LIM1215 KRAS (G12V/+))CVCL_LC82 (LIM1215 KRAS (G13D/+))CVCL_A4IG (LIM1215 PIK3CA (H1047R/+))
CVCL_A4IH (LIM1215 PIK3CA (E545K/+))CVCL_A2CA (LIM1215 R1 Cetux)CVCL_A2CB (LIM1215 R2 Cetux)
CVCL_A2CC (LIM1215 R3 Cetux)CVCL_A2CD (LIM1215 R4 Cetux)CVCL_A2CE (LIM1215 R5 Cetux)
Sex of cell Male
Age at sampling 34Y
Category Cancer cell line
STR profile Source(s): CBA=CBA-0161; PubMed=11416159; PubMed=25926053

Markers:
AmelogeninX (PubMed=11416159)
X,Y (CBA=CBA-0161; PubMed=25926053)
CSF1PO10
D2S133816,21
D3S135815,16
D5S8189,12
D7S8209,10.3
D8S117911,13 (PubMed=11416159)
13 (CBA=CBA-0161)
D13S3178,12
D16S5398,9,11,12 (PubMed=25926053)
8,12 (CBA=CBA-0161)
D18S5112,18
D19S43310,15.2
D21S1129,31
FGA21,23,24
TH019.3,10
TPOX8
vWA15,16 (PubMed=25926053)
16 (CBA=CBA-0161; PubMed=11416159)

Run an STR similarity search on this cell line
Publications

PubMed=3857372; DOI=10.1093/jnci/74.4.759
Robert H. Whitehead, Finlay A. Macrae, D. James B. St John, Jeng Ma;
A colon cancer cell line (LIM1215) derived from a patient with inherited nonpolyposis colorectal cancer.
J. Natl. Cancer Inst. 74:759-765(1985)

PubMed=1427983; DOI=10.1038/icb.1992.30
Robert H. Whitehead, Hui-Hua Zhang, Ian P. Hayward;
Retention of tissue-specific phenotype in a panel of colon carcinoma cell lines: relationship to clinical correlates.
Immunol. Cell Biol. 70:227-236(1992)

PubMed=9328464; DOI=10.1093/hmg/6.12.2011
Andrzej Kilian, David D.L. Bowtell, Helen E. Abud, Gary R. Hime, Deon J. Venter, Paul K. Keese, Emma L. Duncan, Roger Robert Reddel, Richard Anthony Jefferson;
Isolation of a candidate human telomerase catalytic subunit gene, which reveals complex splicing patterns in different cell types.
Hum. Mol. Genet. 6:2011-2019(1997)

PubMed=9515795
Andrew B. Sparks, Patrice J. Morin, Bert Vogelstein, Kenneth Wayne Kinzler;
Mutational analysis of the APC/beta-catenin/Tcf pathway in colorectal cancer.
Cancer Res. 58:1130-1134(1998)

PubMed=11416159; DOI=10.1073/pnas.121616198; PMCID=PMC35459
John R.W. Masters, Jim A. Thomson, Bernadette Daly-Burns, Yvonne A. Reid, Wilhelm Gerhard Dirks, Phil Packer, Lorraine H. Toji, Tadao Ohno, Hideyuki Tanabe, Colin Francis Arlett, Lloyd R. Kelland ...Show all 16 authors... , Maureen Harrison, Arvind K. Virmani, Timothy H. Ward, Karen L. Ayres, Paul G. Debenham; Show fewer authors
Short tandem repeat profiling provides an international reference standard for human cell lines.
Proc. Natl. Acad. Sci. U.S.A. 98:8012-8017(2001)

PubMed=12615714
Paula M. Hempen, Lin Zhang, Ravi K. Bansal, Christine A. Iacobuzio-Donahue, Kathleen M. Murphy, Anirban Maitra, Bert Vogelstein, Robert H. Whitehead, Sanford David Markowitz, James K.V. Willson, Charles J. Yeo ...Show all 13 authors... , Ralph H. Hruban, Scott E. Kern; Show fewer authors
Evidence of selection for clones having genetic inactivation of the activin A type II receptor (ACVR2) gene in gastrointestinal cancers.
Cancer Res. 63:994-999(2003)

PubMed=19378335; DOI=10.1002/ijc.24289
Hui-Hua Zhang, Francesca E. Walker, Sara Kiflemariam, Robert H. Whitehead, David Williams, Wayne A. Phillips, Thomas Mikeska, Alexander Dobrovic, Antony Wilks Burgess;
Selective inhibition of proliferation in colorectal carcinoma cell lines expressing mutant APC or activated B-Raf.
Int. J. Cancer 125:297-307(2009)

PubMed=20570890; DOI=10.1158/0008-5472.CAN-10-0192; PMCID=PMC2943514
Manickam Janakiraman, Efsevia Vakiani, Zhao-Shi Zeng, Christine A. Pratilas, Barry Stephen Taylor, Dhananjay Chitale, Ensar Halilovic, Manda Wilson, Kety Huberman, Julio Cezar Marques Ricarte Filho, Yogindra Persaud ...Show all 21 authors... , Douglas A. Levine, James Alexander Fagin, Suresh C. Jhanwar, John M. Mariadason, Alex Lash, Marc Ladanyi, Leonard B. Saltz, Adriana Heguy, Philip B. Paty, David B. Solit; Show fewer authors
Genomic and biological characterization of exon 4 KRAS mutations in human cancer.
Cancer Res. 70:5901-5911(2010)

PubMed=22722830; DOI=10.1038/nature11156; PMCID=PMC3927413
Sandra Misale, Rona D. Yaeger, Sebastijan Hobor, Elisa Scala, Manickam Janakiraman, David Liska, Emanuele Valtorta, Roberta Schiavo, Michela Buscarino, Giulia Siravegna, Katia Bruna Bencardino ...Show all 26 authors... , Andrea Cercek, Chin-Tung Chen, Silvio Veronese, Carlo Zanon, Andrea Sartore-Bianchi, Marcello Gambacorta, Margherita Gallicchio, Efsevia Vakiani, Valentina Boscaro, Enzo Medico, Martin R. Weiser, Salvatore Siena, Federica Di Nicolantonio, David B. Solit, Alberto Bardelli; Show fewer authors
Emergence of KRAS mutations and acquired resistance to anti-EGFR therapy in colorectal cancer.
Nature 486:532-536(2012)

PubMed=23458625; DOI=10.1021/pr3010869
Susan Fanayan, Joshua T. Smith, Ling Y. Lee, Fang-Fei Yan, Michael P. Snyder, William S. Hancock, Edouard Nice;
Proteogenomic analysis of human colon carcinoma cell lines LIM1215, LIM1899, and LIM2405.
J. Proteome Res. 12:1732-1742(2013)

PubMed=24295106; DOI=10.1021/pr400861m
Manveen K. Sethi, Morten Thaysen-Andersen, Joshua T. Smith, Mark Scott Baker, Nicolle H. Packer, William S. Hancock, Susan Fanayan;
Comparative N-glycan profiling of colorectal cancer cell lines reveals unique bisecting GlcNAc and alpha-2,3-linked sialic acid determinants are associated with membrane proteins of the more metastatic/aggressive cell lines.
J. Proteome Res. 13:277-288(2014)

PubMed=24755471; DOI=10.1158/0008-5472.CAN-14-0013
Dmitri Mouradov, Clare Sloggett, Robert N. Jorissen, Christopher G. Love, Shan Li, Antony Wilks Burgess, Diego Arango, Robert L. Strausberg, Daniel Buchanan, Samuel Wormald, Liam O'Connor ...Show all 17 authors... , Jennifer L. Wilding, David C. Bicknell, Ian Philip Mark Tomlinson, Walter Fred Bodmer, John M. Mariadason, Oliver M. Sieber; Show fewer authors
Colorectal cancer cell lines are representative models of the main molecular subtypes of primary cancer.
Cancer Res. 74:3238-3247(2014)

PubMed=25623215; DOI=10.1158/1078-0432.CCR-14-2821
Sabrina Arena, Beatriz Bellosillo, Giulia Siravegna, Alejandro Martinez, Israel Canadas, Luca Lazzari, Noelia Ferruz, Mariangela Russo, Sandra Misale, Iria Gonzalez, Mar Iglesias ...Show all 25 authors... , Elena Gavilan, Giorgio Corti, Sebastijan Hobor, Giovanni Crisafulli, Marta Salido, Juan Sanchez, Alba Dalmases, Joaquim Bellmunt, Gianni De Fabritiis, Ana Rovira, Federica Di Nicolantonio, Joan Albanell, Alberto Bardelli, Clara Montagut; Show fewer authors
Emergence of multiple EGFR extracellular mutations during cetuximab treatment in colorectal cancer.
Clin. Cancer Res. 21:2157-2166(2015)

PubMed=25926053; DOI=10.1038/ncomms8002
Enzo Medico, Mariangela Russo, Gabriele Picco, Carlotta Cancelliere, Emanuele Valtorta, Giorgio Corti, Michela Buscarino, Claudio Isella, Simona Lamba, Barbara Martinoglio, Silvio Veronese ...Show all 19 authors... , Salvatore Siena, Andrea Sartore-Bianchi, Marco Beccuti, Marcella Mottolese, Michael Linnebacher, Francesca Cordero, Federica Di Nicolantonio, Alberto Bardelli; Show fewer authors
The molecular landscape of colorectal cancer cell lines unveils clinically actionable kinase targets.
Nat. Commun. 6:7002.1-7002.10(2015)

PubMed=25944804; DOI=10.1158/1078-0432.CCR-14-2457
Sarah Bazzocco, Higinio Dopeso, Fernando Carton-Garcia, Irati Macaya, Elena Andretta, Fiona Chionh, Paulo Rodrigues, Miriam Garrido, Hafid Alazzouzi, Rocio Nieto, Alex Sanchez ...Show all 15 authors... , Simo Schwartz Jr., Josipa Bilic, John M. Mariadason, Diego Arango; Show fewer authors
Highly expressed genes in rapidly proliferating tumor cells as new targets for colorectal cancer treatment.
Clin. Cancer Res. 21:3695-3704(2015)

PubMed=28854368; DOI=10.1016/j.celrep.2017.08.010; PMCID=PMC5583477
Theodoros I. Roumeliotis, Steven P. Williams, Emanuel Goncalves, Clara Alsinet, Martin Del Castillo Velasco-Herrera, Nanne Aben, Fatemeh Zamanzad Ghavidel, Magali Michaut, Michael Schubert, Stacey Price, James C. Wright ...Show all 24 authors... , Lu Yu, Mi Yang, Rodrigo Dienstmann, Justin H. Guinney, Pedro Beltrao, Alvis Brazma, Mercedes Pardo, Oliver Stegle, David J. Adams, Lodewyk F.A. Wessels, Julio Saez-Rodriguez, Ultan McDermott, Jyoti S. Choudhary; Show fewer authors
Genomic determinants of protein abundance variation in colorectal cancer cells.
Cell Rep. 20:2201-2214(2017)

PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747; PMCID=PMC6445675
Julie Dutil, Zhi-Hua Chen, Alvaro N.A. Monteiro, Jamie K. Teer, Steven A. Eschrich;
An interactive resource to probe genetic diversity and estimated ancestry in cancer cell lines.
Cancer Res. 79:1263-1273(2019)

Cross-references
Cell line collections (Providers) CBA; CBA-0161
ECACC; 10092301
Cell line databases/resources cancercelllines; CVCL_2574
Cell_Model_Passport; SIDM00014
ColonAtlas; LIM1215
Cosmic-CLP; 2162949
DepMap; ACH-001546 - Discontinued
Anatomy/cell type resources BTO; BTO_0001916
Biological sample resources BioSample; SAMN07624413
Chemistry resources GDSC; 869795
GDSC; 2162949
PharmacoDB; LIM1215_836_2019
Encyclopedic resources Wikidata; Q54902517
Experimental variables resources EFO; EFO_0022437
Gene expression databases GEO; GSM741246
GEO; GSM1346878
GEO; GSM1448118
Polymorphism and mutation databases Cosmic; 869795
Cosmic; 1184335
Cosmic; 1238050
Cosmic; 1479632
Cosmic; 1482515
Cosmic; 1486135
Cosmic; 1524335
Cosmic; 1676746
Cosmic; 1805257
Cosmic; 2301991
Cosmic; 2667967
Cosmic; 2787550
Cosmic; 2841366
IARC_TP53; 22464
Proteomic databases PRIDE; PXD000120
PRIDE; PXD005235
Entry history
Entry creation04-Apr-2012
Last entry update10-Apr-2025
Version number39