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Cellosaurus COLO 853 (CVCL_2003)

[Text version]

Cell line name COLO 853
Synonyms COLO-853; Colo 853; Colorado 853
Accession CVCL_2003
Resource Identification Initiative To cite this cell line use: COLO 853 (RRID:CVCL_2003)
Comments Population: Caucasian.
Omics: Deep RNAseq analysis.
Omics: SNP array analysis.
Disease Cutaneous melanoma (NCIt: C3510)
Derived from metastatic site: Right axillary lymph node.
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Originate from same individual CVCL_1137 ! COLO 829
CVCL_1999 ! COLO 829BL
CVCL_L503 ! COLO 831
CVCL_2000 ! COLO 832
CVCL_L504 ! COLO 833
CVCL_L505 ! COLO 834
CVCL_L506 ! COLO 835
CVCL_L507 ! COLO 838
CVCL_2001 ! COLO 839
CVCL_L508 ! COLO 845
CVCL_L509 ! COLO 848
CVCL_2002 ! COLO 849
CVCL_2004 ! COLO 857
CVCL_2005 ! COLO 858
Sex of cell Male
Age at sampling 43Y
Category Cancer cell line
STR profile Source(s): ECACC

Markers:
AmelogeninX
CSF1PO11
D5S81811
D7S8208,10
D13S31711,12
D16S53913
TH0110
TPOX8,11
vWA17,19

Run an STR similarity search on this cell line
Publications

PubMed=20215515; DOI=10.1158/0008-5472.CAN-09-3458
Rothenberg S.M., Mohapatra G., Rivera M.N., Winokur D., Greninger P., Nitta M., Sadow P.M., Sooriyakumar G., Brannigan B.W., Ulman M.J., Perera R.M., Wang R., Tam A., Ma X.-J., Erlander M., Sgroi D.C., Rocco J.W., Lingen M.W., Cohen E.E.W., Louis D.N., Settleman J., Haber D.A.
A genome-wide screen for microdeletions reveals disruption of polarity complex genes in diverse human cancers.
Cancer Res. 70:2158-2164(2010)

PubMed=25485619; DOI=10.1038/nbt.3080
Klijn C., Durinck S., Stawiski E.W., Haverty P.M., Jiang Z.-S., Liu H.-B., Degenhardt J., Mayba O., Gnad F., Liu J.-F., Pau G., Reeder J., Cao Y., Mukhyala K., Selvaraj S.K., Yu M.-M., Zynda G.J., Brauer M.J., Wu T.D., Gentleman R.C., Manning G., Yauch R.L., Bourgon R., Stokoe D., Modrusan Z., Neve R.M., de Sauvage F.J., Settleman J., Seshagiri S., Zhang Z.-M.
A comprehensive transcriptional portrait of human cancer cell lines.
Nat. Biotechnol. 33:306-312(2015)

Cross-references
Cell line collections ECACC; 93052606
ICLC; HTL96001
Cell line databases/resources CLO; CLO_0002567
CLDB; cl859
CLDB; cl860
LINCS_LDP; LCL-1240
Chemistry resources PharmacoDB; COLO853_219_2019
Encyclopedic resources Wikidata; Q54814169
Experimental variables resources EFO; EFO_0006380
Gene expression databases ArrayExpress; E-MTAB-2706
GEO; GSM827310
Polymorphism and mutation databases IARC_TP53; 21248
Progenetix; CVCL_2003
Sequence databases EGA; EGAS00001000610
Entry history
Entry creation04-Apr-2012
Last entry update23-Jun-2022
Version number21