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Cellosaurus COLO 829BL (CVCL_1999)

[Text version]
Cell line name COLO 829BL
Synonyms COLO-829BL; COLO-829-BL; COLO 829 BL; COLO829-BL; COLO829BL; Colorado 829BL
Accession CVCL_1999
Resource Identification Initiative To cite this cell line use: COLO 829BL (RRID:CVCL_1999)
Comments Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Population: Caucasian.
Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV).
Omics: Genomics; Whole exome sequencing.
Omics: Genomics; Whole genome sequencing.
Omics: Variations; SNP array analysis.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
Cell type: B-cell; CL=CL_0000236.
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Originate from same individual CVCL_1137 ! COLO 829
CVCL_L503 ! COLO 831
CVCL_2000 ! COLO 832
CVCL_L504 ! COLO 833
CVCL_L505 ! COLO 834
CVCL_L506 ! COLO 835
CVCL_L507 ! COLO 838
CVCL_2001 ! COLO 839
CVCL_L508 ! COLO 845
CVCL_L509 ! COLO 848
CVCL_2002 ! COLO 849
CVCL_2003 ! COLO 853
CVCL_2004 ! COLO 857
CVCL_2005 ! COLO 858
Sex of cell Male
Age at sampling 45Y
Category Transformed cell line
STR profile Source(s): ATCC=CRL-1980

Markers:
AmelogeninX,Y
CSF1PO11,13
D2S133818,26
D3S135816,18
D5S81811,12
D7S8208,10
D8S117913,14
D13S31711,12
D16S53911,13
D18S5115
D19S43314,15
D21S1127,29
FGA21,25
Penta D9,14
Penta E7,12
TH0110
TPOX8,11
vWA17,19

Run an STR similarity search on this cell line
Publications

PubMed=14762065; DOI=10.1101/gr.2012304; PMCID=PMC327104
Graham Robert Bignell, Jing Huang, Joel Greshock, Stephen Watt, Adam P. Butler, Sofie West, Mira Grigorova, Keith W. Jones, Wen Wei, Michael Rudolf Stratton, P. Andrew Futreal ...Show all 14 authors... , Bernard Weber, Michael H. Shapero, Richard Wooster; Show fewer authors
High-resolution analysis of DNA copy number using oligonucleotide microarrays.
Genome Res. 14:287-295(2004)

PubMed=20016485; DOI=10.1038/nature08658; PMCID=PMC3145108
Erin D. Pleasance, R. Keira Cheetham, Philip J. Stephens, David J. McBride, Sean J. Humphray, Christopher D. Greenman, Ignacio Varela, Meng-Lay Lin, Gonzalo R. Ordonez, Graham Robert Bignell, Kai Ye ...Show all 45 authors... , Julie A. Alipaz, Markus J. Bauer, David Beare, Adam P. Butler, Richard J. Carter, Lina Chen, Anthony J. Cox, Sarah Edkins, Paula I. Kokko-Gonzales, Niall A. Gormley, Russell J. Grocock, Christian D. Haudenschild, Matthew M. Hims, Terena James, Ming-Ming Jia, Zoya Kingsbury, Catherine Leroy, John Marshall, Andrew Menzies, Laura J. Mudie, Ze-Min Ning, Thomas Royce, Ole B. Schulz-Trieglaff, Anastassia Spiridou, Lucy A. Stebbings, Lukasz Szajkowski, Jon W. Teague, David Williamson, Lynda Chin, Mark T. Ross, Peter J. Campbell, David R. Bentley, P. Andrew Futreal, Michael Rudolf Stratton; Show fewer authors
A comprehensive catalogue of somatic mutations from a human cancer genome.
Nature 463:191-196(2010)

PubMed=20164919; DOI=10.1038/nature08768; PMCID=PMC3145113
Graham Robert Bignell, Christopher D. Greenman, Helen R. Davies, Adam P. Butler, Sarah Edkins, Jenny M. Andrews, Gemma Buck, Lina Chen, David Beare, Calli Latimer, Sara Widaa ...Show all 22 authors... , Jonathan Hinton, Ciara Fahey, Bei-Yuan Fu, Sajani Swamy, Gillian L. Dalgliesh, Bin Tean Teh, Panos Deloukas, Feng-Tang Yang, Peter J. Campbell, P. Andrew Futreal, Michael Rudolf Stratton; Show fewer authors
Signatures of mutation and selection in the cancer genome.
Nature 463:893-898(2010)

PubMed=27094764; DOI=10.1038/srep24607; PMCID=PMC4837349
David Wesley Craig, Sara Nasser, Richard D. Corbett, Simon K. Chan, Lisa Murray, Christophe Legendre, Waibhav Tembe, Jonathan Adkins, Nancy Kim, Shuk-Mei Wong, Angela Baker ...Show all 22 authors... , Daniel Enriquez, Stephanie Pond, Erin D. Pleasance, Andrew J. Mungall, Richard A. Moore, Timothy McDaniel, Yussanne Ma, Steven J.M. Jones, Marco Antonio Marra, John D. Carpten, Winnie S. Liang; Show fewer authors
A somatic reference standard for cancer genome sequencing.
Sci. Rep. 6:24607-24607(2016)

Cross-references
Cell line collections (Providers) ATCC; CRL-1980
Cell line databases/resources CLO; CLO_0002564
Cell_Model_Passport; SIDM00908
DepMap; ACH-002380
Biological sample resources BioSample; SAMN03471268
Encyclopedic resources Wikidata; Q54814158
Sequence databases dbGAP; phs001839.v1.p1
EGA; EGAS00000000052
Entry history
Entry creation04-Apr-2012
Last entry update10-Apr-2025
Version number25