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Cellosaurus MDA-MB-435S (CVCL_0622)

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Cell line name MDA-MB-435S
Synonyms MDA-MB-435s; MDA-MB-435 S; MDA-MB-435-S; MDAMB435S; BrCL15
Accession CVCL_0622
Resource Identification Initiative To cite this cell line use: MDA-MB-435S (RRID:CVCL_0622)
Comments Problematic cell line: Contaminated. Parent cell line (MDA-MB-435) has been shown to be a M14 derivative.
Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Part of: KuDOS 95 cell line panel.
Registration: International Cell Line Authentication Committee, Register of Misidentified Cell Lines; ICLAC-00565.
Population: Caucasian.
Microsatellite instability: Stable (MSS) (PubMed=12661003).
Omics: Genomics; Whole exome sequencing.
Omics: Transcriptomics; Microarray.
Omics: Transcriptomics; miRNA profiling; Microarray.
Omics: Transcriptomics; RNAseq.
Omics: Variations; Array-based CGH.
Omics: Variations; SNP array analysis.
Derived from site: Metastatic; Right buttock, hypodermis; UBERON=UBERON_0013691+UBERON_0002072.
Sequence variations
  • Mutation; HGNC; HGNC:1097; BRAF; Simple; p.Val600Glu (c.1799T>A); ClinVar=VCV000013961; Zygosity=Heterozygous (PubMed=19593635; DepMap=ACH-000884).
  • Mutation; HGNC; HGNC:1787; CDKN2A; Simple; c.150+2T>C (IVS1+2T>C); ClinVar=VCV000406712; Zygosity=Heterozygous; Note=Splice donor mutation (PubMed=19593635).
  • Mutation; HGNC; HGNC:1787; CDKN2A; Simple; c.455insCdel26; Zygosity=Heterozygous (PubMed=19593635).
  • Mutation; HGNC; HGNC:3373; EP300; Simple; p.Leu827Pro (c.2480T>C); Zygosity=Hemizygous (PubMed=10700188).
  • Mutation; HGNC; HGNC:3373; EP300; Simple; p.Glu1013Gly (c.3038A>G); ClinVar=VCV000562024; Zygosity=Hemizygous (PubMed=10700188).
  • Mutation; HGNC; HGNC:11998; TP53; Simple; p.Gly266Glu (c.797G>A); ClinVar=VCV000161516; Zygosity=Heterozygous (PubMed=16541312; DepMap=ACH-000884).
HLA typing Source: PubMed=26589293
Class I
HLA-AA*24:02,24:02
HLA-BB*15:01,15:01
HLA-CC*03:03,03:03
Genome ancestry Source: PubMed=30894373

Origin% genome
African0.01
Native American0
East Asian, North2.13
East Asian, South0
South Asian0
European, North65.23
European, South32.63
Disease Amelanotic melanoma (NCIt: C3802)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Parent: CVCL_0417 (MDA-MB-435)
Children:
CVCL_A6LJ (MDA-MB-435S/1)CVCL_5T70 (MDA-MB-435s-mKate2)
Sex of cell Male
Age at sampling 33Y
Category Cancer cell line
STR profile Source(s): ATCC=HTB-129; CCRID; CLS=300277; PubMed=28940260

Markers:
AmelogeninX
CSF1PO11 (ATCC=HTB-129; CCRID; CLS=300277)
11,12 (PubMed=28940260)
D1S165612
D2S133819,24
D3S135814 (ATCC=HTB-129; CLS=300277; PubMed=28940260)
14,20 (CCRID)
D5S81811,12 (CCRID)
12 (ATCC=HTB-129; CLS=300277; PubMed=28940260)
D6S104311
D7S8208 (PubMed=28940260)
8,10 (ATCC=HTB-129; CCRID; CLS=300277)
D8S117913 (ATCC=HTB-129; CCRID; CLS=300277)
13,14 (PubMed=28940260)
D12S39118,19
D13S31712 (ATCC=HTB-129; CCRID; PubMed=28940260)
12,13 (CLS=300277)
D16S53913
D18S5113 (ATCC=HTB-129; PubMed=28940260)
13,17 (CLS=300277)
D19S43314 (CCRID)
14,15 (ATCC=HTB-129; CLS=300277; PubMed=28940260)
D21S1130
FGA21
Penta D9,11
Penta E10,12
TH016,7
TPOX8,11
vWA16,18

Run an STR similarity search on this cell line
Web pages Info; ATCC; -; https://www.atcc.org/en/support/technical-support/faqs/atcc-htb-129-derivative
Info; ATCC; -; https://www.atcc.org/en/support/technical-support/faqs/atcc-htb-129-vs-mda-mb-435
Info; ICLAC; -; https://iclac.org/wp-content/uploads/Cross-Contaminations_v13_distribution.xlsx
Publications

PubMed=2007622; DOI=10.1083/jcb.113.1.173; PMCID=PMC2288921
Uwe H. Frixen, Jurgen Behrens, Martin Sachs, Gertrud Eberle, Beate Voss, Angelika Warda, Dorothea Lochner, Walter Birchmeier;
E-cadherin-mediated cell-cell adhesion prevents invasiveness of human carcinoma cells.
J. Cell Biol. 113:173-185(1991)

DOI=10.1016/B978-0-12-333530-2.50009-5
Albert Leibovitz;
Cell lines from human breast.
(In book chapter) Atlas of human tumor cell lines; Hay, Robert J. & Park, Jae-Gahb & Gazdar, Adi F. (eds.); pp.161-184; Academic Press; New York; USA (1994)

PubMed=10700188; DOI=10.1038/73536
Simon Andrew Gayther, Sarah J. Batley, Lori Linger, Andrew J. Bannister, Karen Thorpe, Suet-Feung Chin, Yataro Daigo, Paul Russell, Annie Wilson, Heidi M. Sowter, Joy Dorothy Ann Delhanty, Bruce Anthony John Ponder, Tony Kouzarides ...Show all 14 authors... , Carlos Caldas; Show fewer authors
Mutations truncating the EP300 acetylase in human cancers.
Nat. Genet. 24:300-303(2000)

PubMed=12354931; DOI=10.1136/mp.55.5.294; PMCID=PMC1187258
Gillian Ellison, Teresa Klinowska, R.F. Russell Westwood, E. Docter, Tim French, Jayne Catherine Fox;
Further evidence to support the melanocytic origin of MDA-MB-435.
Mol. Pathol. 55:294-299(2002)

PubMed=12661003; DOI=10.1002/gcc.10196
Susanne Seitz, Peter Wassmuth, Jens Plaschke, Hans Konrad Schackert, Uwe Karsten, Mauro F. Santibanez-Koref, Peter Michael Schlag, Siegfried Scherneck;
Identification of microsatellite instability and mismatch repair gene mutations in breast cancer cell lines.
Genes Chromosomes Cancer 37:29-35(2003)

PubMed=15677628; DOI=10.1093/carcin/bgi032
Kylie Louise Gorringe, Suet-Feung Chin, Paul D.P. Pharoah, Joanne M. Staines, Carla Oliveira, Paul A.W. Edwards, Carlos Caldas;
Evidence that both genetic instability and selection contribute to the accumulation of chromosome alterations in cancer.
Carcinogenesis 26:923-930(2005)

PubMed=16397213; DOI=10.1158/0008-5472.CAN-05-2853
Fons Elstrodt, Antoinette Hollestelle, Jord H.A. Nagel, Michael Gorin, Marijke Wasielewski, Ans M.W. van den Ouweland, Sofia Diana Merajver, Stephen P. Ethier, Mieke Schutte;
BRCA1 mutation analysis of 41 human breast cancer cell lines reveals three new deleterious mutants.
Cancer Res. 66:41-45(2006)

PubMed=16541312; DOI=10.1007/s10549-006-9186-z
Marijke Wasielewski, Fons Elstrodt, Jan G.M. Klijn, Els M.J.J. Berns, Mieke Schutte;
Thirteen new p53 gene mutants identified among 41 human breast cancer cell lines.
Breast Cancer Res. Treat. 99:97-101(2006)

PubMed=19593635; DOI=10.1007/s10549-009-0460-8
Antoinette Hollestelle, Jord H.A. Nagel, Marcel Smid, Suzanne Lam, Fons Elstrodt, Marijke Wasielewski, Ser Sue Ng, Pim J. French, Justine K. Peeters, Marieke J. Rozendaal, Muhammad Riaz, Daphne G. Koopman, Timo L.M. ten Hagen ...Show all 26 authors... , Bertie H.C.G.M. de Leeuw, Ellen C. Zwarthoff, Amina F.A.S. Teunisse, Peter J. van der Spek, Jan G.M. Klijn, Winand N.M. Dinjens, Stephen P. Ethier, Hans Cornelius Clevers, Aart G. Jochemsen, Michael A. den Bakker, John A. Foekens, John W.M. Martens, Mieke Schutte; Show fewer authors
Distinct gene mutation profiles among luminal-type and basal-type breast cancer cell lines.
Breast Cancer Res. Treat. 121:53-64(2010)

PubMed=20070913; DOI=10.1186/1471-2407-10-15; PMCID=PMC2836299
Katumi Tsuji, Shigeto Kawauchi, Soichiro Saito, Tomoko Furuya, Kenzo Ikemoto, Motonao Nakao, Shigeru Yamamoto, Masaaki Oka, Takashi Hirano, Kohsuke Sasaki;
Breast cancer cell lines carry cell line-specific genomic alterations that are distinct from aberrations in breast cancer tissues: comparison of the CGH profiles between cancer cell lines and primary cancer tissues.
BMC Cancer 10:15.1-15.10(2010)

PubMed=22460905; DOI=10.1038/nature11003; PMCID=PMC3320027
Jordi Ginesta Barretina, Giordano Caponigro, Nicolas Stransky, Kavitha Venkatesan, Adam A. Margolin, Sungjoon Kim, Christopher J. Wilson, Joseph Lehar, Gregory V. Kryukov, Dmitriy Sonkin, Anupama Reddy, Manway Liu, Lauren Murray ...Show all 61 authors... , Michael F. Berger, John E. Monahan, Paula Morais, Jodi Meltzer, Adam Korejwa, Judit Jane-Valbuena, Felipa A. Mapa, Joseph Thibault, Eva Bric-Furlong, Pichai Raman, Aaron Shipway, Ingo H. Engels, Jill Cheng, Guo-Ying K. Yu, Jian-Jun Yu, Peter Aspesi Jr., Melanie de Silva, Kalpana Jagtap, Michael D. Jones, Li Wang, Charles Hatton, Emanuele Palescandolo, Supriya Gupta, Scott Mahan, Carrie Sougnez, Robert C. Onofrio, Ted Liefeld, Laura E. MacConaill, Wendy Winckler, Michael Reich, Nan-Xin Li, Jill P. Mesirov, Stacey B. Gabriel, Gad Getz, Kristin Ardlie, Vivien Chan, Vic E. Myer, Barbara L. Weber, Jeff Porter, Markus Warmuth, Peter Finan, Jennifer L. Harris, Matthew Langer Meyerson, Todd Robert Golub, Michael P. Morrissey, William Raj Sellers, Robert Schlegel, Levi Alexander Garraway; Show fewer authors
The Cancer Cell Line Encyclopedia enables predictive modelling of anticancer drug sensitivity.
Nature 483:603-607(2012)

PubMed=23601657; DOI=10.1186/bcr3415; PMCID=PMC3672661
Muhammad Riaz, Marijn T.M. van Jaarsveld, Antoinette Hollestelle, Wendy J.C. Prager-van der Smissen, Anouk A.J. Heine, Antonius W.M. Boersma, Jing-Jing Liu, Jean C.A. Helmijr, Bahar Ozturk, Marcel Smid, Erik A.C. Wiemer, John A. Foekens, John W.M. Martens; Show fewer authors ...Show all 13 authors...
miRNA expression profiling of 51 human breast cancer cell lines reveals subtype and driver mutation-specific miRNAs.
Breast Cancer Res. 15:R33.1-R33.17(2013)

PubMed=26589293; DOI=10.1186/s13073-015-0240-5; PMCID=PMC4653878
Jelle Scholtalbers, Sebastian Boegel, Thomas Bukur, Marius Byl, Sebastian Goerges, Patrick Sorn, Martin Loewer, Ugur Sahin, John C. Castle;
TCLP: an online cancer cell line catalogue integrating HLA type, predicted neo-epitopes, virus and gene expression.
Genome Med. 7:118.1-118.7(2015)

PubMed=28940260; DOI=10.1002/ijc.31067; PMCID=PMC5762610
Christopher T. Korch, Erin M. Hall, Wilhelm Gerhard Dirks, Margaret Ewing, Mark Faries, Marileila Varella-Garcia, Steven Robinson, Douglas R. Storts, Jacqueline A. Turner, Ying Wang, Edward C. Burnett, Lyn E. Healy, Douglas A. Kniss ...Show all 18 authors... , Richard M. Neve, Raymond Whiting Nims, Yvonne A. Reid, William A. Robinson, Amanda Capes-Davis; Show fewer authors
Authentication of M14 melanoma cell line proves misidentification of MDA-MB-435 breast cancer cell line.
Int. J. Cancer 142:561-572(2018)

PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747; PMCID=PMC6445675
Julie Dutil, Zhi-Hua Chen, Alvaro N.A. Monteiro, Jamie K. Teer, Steven A. Eschrich;
An interactive resource to probe genetic diversity and estimated ancestry in cancer cell lines.
Cancer Res. 79:1263-1273(2019)

PubMed=31068700; DOI=10.1038/s41586-019-1186-3; PMCID=PMC6697103
Mahmoud Ghandi, Franklin W. Huang, Judit Jane-Valbuena, Gregory V. Kryukov, Christopher C. Lo, E. Robert McDonald 3rd, Jordi Ginesta Barretina, Ellen T. Gelfand, Craig M. Bielski, Hao-Xin Li, Kevin Hu, Alexander Y. Andreev-Drakhlin, Jaegil Kim ...Show all 68 authors... , Julian M. Hess, Brian J. Haas, Francois Aguet, Barbara A. Weir, Michael V. Rothberg, Brenton R. Paolella, Michael Scott Lawrence, Rehan Akbani, Yi-Ling Lu, Hong L. Tiv, Prafulla C. Gokhale, Antoine de Weck, Ali Amin Mansour, Coyin Oh, Juliann Shih, Kevin Hadi, Yanay Rosen, Jonathan Bistline, Kavitha Venkatesan, Anupama Reddy, Dmitriy Sonkin, Manway Liu, Joseph Lehar, Joshua M. Korn, Dale A. Porter, Michael D. Jones, Javad Golji, Giordano Caponigro, Jordan E. Taylor, Caitlin M. Dunning, Amanda L. Creech, Allison C. Warren, James M. McFarland, Mahdi Zamanighomi, Audrey Kauffmann, Nicolas Stransky, Marcin Imielinski, Yosef E. Maruvka, Andrew D. Cherniack, Aviad Tsherniak, Francisca Vazquez, Jacob D. Jaffe, Andrew Alan Lane, David M. Weinstock, Cory M. Johannessen, Michael P. Morrissey, Frank Stegmeier, Robert Schlegel, William Chun Hahn, Gad Getz, Gordon B. Mills, Jesse S. Boehm, Todd Robert Golub, Levi Alexander Garraway, William Raj Sellers; Show fewer authors
Next-generation characterization of the Cancer Cell Line Encyclopedia.
Nature 569:503-508(2019)

Cross-references
Cell line collections (Providers) ATCC; HTB-129
BCRJ; 0165
CCTCC; GDC0053
CLS; 300277
ICLC; HTL03006
KCB; KCB 200773YJ
Cell line databases/resources CLO; CLO_0007638
CLDB; cl7142
cancercelllines; CVCL_0622
CCRID; 1101HUM-PUMC000015
CCRID; 3101HUMTCHu36
Cell_Model_Passport; SIDM01222
DepMap; ACH-000884
LINCS_HMS; 50030
LINCS_LDP; LCL-1307
Anatomy/cell type resources BTO; BTO_0003941
Biological sample resources BioSample; SAMN10987989
CRISP screens repositories BioGRID_ORCS_Cell_line; 567
Chemistry resources ChEMBL-Cells; CHEMBL4483174
ChEMBL-Targets; CHEMBL4483284
PubChem_Cell_line; CVCL_0622
Encyclopedic resources Wikidata; Q54904637
Gene expression databases ArrayExpress; E-MTAB-2770
GEO; GSM149983
GEO; GSM149991
GEO; GSM149999
GEO; GSM421877
GEO; GSM887298
GEO; GSM888373
GEO; GSM1374657
Polymorphism and mutation databases Cosmic; 809237
Cosmic; 871155
Cosmic; 894089
Cosmic; 904381
Cosmic; 1044202
Cosmic; 1046951
Cosmic; 1287922
Cosmic; 1289399
Cosmic; 1523969
Cosmic; 1609477
Cosmic; 2301531
LiGeA; CCLE_408
Progenetix; CVCL_0622
Proteomic databases PRIDE; PXD016837
Entry history
Entry creation04-Apr-2012
Last entry update10-Apr-2025
Version number43