Cellosaurus logo
expasy logo

Cellosaurus publication CLPUB00276

Publication number CLPUB00276
Authors Culp P.A.
Title Random DNA integrations as an approach to insertional mutagenesis in the zebrafish (Brachydanio rerio).
Citation Thesis PhD (1994), Massachusetts Institute of Technology, United States
Web pages https://hdl.handle.net/1721.1/33505
Abstract With the goal of developing techniques for DNA insertional mutagenesis in zebrafish, we established procedures for rapidly obtaining and injecting large numbers of fertilized eggs. Using either of two plasmid constructs, we injected uncut DNA into fertilized eggs at the one-or two-cell stage. Injected eggs were raised to sexual maturity and the frequency of transgenic founder fish determined by pair mating them and testing DNA extracted from pools of 16-hour embryos using PCR and subsequently Southern analysis. Eggs injected with one of two different plasmids yielded no transgenic fish, but 7-25% (19/115 overall) of the eggs injected with the other transmitted the injected sequences to their offspring (F1). Of nineteen lines studied further, all were able to pass the foreign DNA sequences to the next (F2) generation. Inheritance in the F2 was Mendelian in the seventeen lines tested. PCR and Southern analysis indicated that the plasmid sequences were amplified. Three founder fish possessed more than one integration event, and multiple integrations were found to occur both in the same germline precursor cell, as well as in different precursors. Although the plasmids injected into the embryos contained a functional lacZ gene, of twelve lines tested, none of the transgenic offspring were found to be XGAL-positive. Of thirteen transgenic lines tested, in only one line was RNA detected in the offspring. The ability to obtain and inject large numbers of zebrafish eggs combined with a high frequency of germline integration may be steps towards the goal of being able to perform insertional mutagenesis with this organism. In a screen for mutant phenotypes caused by the insertion of transgenes into the zebrafish genome, nineteen transgenic lines were bred to homozygosity. None of the nineteen lines displayed a discernible phenotype in the homozygous state. Homozygous adult fish were identified in each of the nineteen transgenic lines, and all were fertile. Seventeen lines were screened for mutations exhibiting a strict maternal phenotype, and no mutants were identified. Homozygous lines were generated from each of twelve transgenic lines, and all were fertile. Cloning the sequences flanking the insertions of two transgenic lines revealed that these transgenes had integrated into single-copy sequences of the zebrafish genome. Analysis of one transgenic line studied further revealed that the insertion of the transgene had occurred with very little disruption to the host chromosome: 12 bp had been deleted from the host chromosome, while 23 bp had been deleted from the plasmid. In an effort to determine whether the insertion of DNA randomly into the genome of the zebrafish is potentially mutagenic, gene trap constructs were introduced into cultured zebrafish cells. This cell line, PAC2, is highly transfectable and demonstrates a high efficiency of cloning. A second cell line which was also established, HetA, is also transfectable, but these cells are not clonable. The introduction of lacZ gene trap constructs into PAC2 cells resulted in a very low frequency of XGAL-positive colonies. It was found that only by using a very strong promoter or by concentrating the protein in the nucleus can a level of lacZ expression be attained for efficient detection by the XGAL test. In contrast, PAC2 cells are capable of activating a promoterless neomycin gene at a frequency similar to that observed in cultured mouse cells. Analysis of the fusion transcript of one of the neomycin resistant PAC2 clones demonstrated that the neomycin resistance gene was activated by fusion with a gene normally expressed in PAC2 cells. Thus, DNA is capable of integrating into expressed zebrafish genes, indicating that random DNA integration is a feasible approach for insertional mutagenesis in the zebrafish.
Cell lines CVCL_5F69; HetA
CVCL_5853; PAC2