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Cellosaurus (CVCL_XB34)

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Comments Microsatellite instability: Instable (MSI-low) (Sanger).
Omics: Genomics; DNA methylation analysis.
Omics: Genomics; Whole exome sequencing.
Omics: Phenotyping; CRISPR screening.
Omics: Phenotyping; Drug screening.
Omics: Phenotyping; shRNA library screening.
Omics: Proteomics.
Omics: Proteomics; Quantitative.
Omics: Transcriptomics; Microarray.
Omics: Transcriptomics; RNAseq.
Omics: Variations; SNP array analysis.
Derived from site: In situ; Pancreas; UBERON=UBERON_0001264.
Sequence variations
  • Mutation; HGNC; HGNC:6407; KRAS; Simple; p.Gly12Asp (c.35G>A); ClinVar=VCV000012582; Zygosity=Homozygous (PubMed=9612602; ATCC=CRL-2551).
  • Mutation; HGNC; HGNC:6770; SMAD4; Simple; p.Cys123Metfs*2 (c.366dupA) (c.366_367insA); Zygosity=Homozygous (ATCC=CRL-2551).
Genome ancestry Source: PubMed=30894373

Origin% genome
African2.26
Native American0.57
East Asian, North2.49
East Asian, South0
South Asian0
European, North62.31
European, South32.37
Disease Pancreatic ductal adenocarcinoma (NCIt: C9120)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Male
Age at sampling 85Y
Category Cancer cell line
STR profile Source(s): ATCC=CRL-2551; Cosmic-CLP=925347; PubMed=25877200

Markers:
AmelogeninX
CSF1PO11
D2S133817,18
D3S135816
D5S81813,14
D7S82011
D8S117910,14
D13S31713
D16S53913
D18S5119
D19S43313
D21S1132.2
FGA21,23
Penta D10
Penta E5,16,17
TH016,9.3
TPOX8,12
vWA18

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Entry history
Entry creation04-Apr-2012
Last entry update10-Apr-2025
Version number42