| Cell line name |
SJG-8 |
| Synonyms |
SJG-008 |
| Accession |
CVCL_WV09 |
| Resource Identification Initiative |
To cite this cell line use: SJG-8 (RRID:CVCL_WV09) |
| Comments |
Omics: Genomics; Whole exome sequencing. Miscellaneous: STR profile from personal communication of Broad, Simon. Derived from site: In situ; Oral cavity, alveolar ridge; UBERON=UBERON_0004103. |
| Sequence variations |
- Mutation; HGNC; HGNC:3595; FAT1; Simple; p.Thr677fs (c.2029_2036delACACCAGT); Zygosity=Unspecified (PubMed=27693639).
- Mutation; HGNC; HGNC:7989; NRAS; Simple; p.Asp154His (c.460G>C); Zygosity=Unspecified (PubMed=27693639).
- Mutation; HGNC; HGNC:11998; TP53; Simple; p.Trp53Ter (c.159G>A); ClinVar=VCV000420659; Zygosity=Unspecified (PubMed=27693639).
- Mutation; HGNC; HGNC:11998; TP53; Simple; p.Arg175His (c.524G>A); ClinVar=VCV000012374; Zygosity=Unspecified (PubMed=27693639).
|
| Disease |
Alveolar ridge squamous cell carcinoma (NCIt: C170774) Squamous cell carcinoma of the oral cavity (ORDO: Orphanet_502363) |
| Species of origin |
Homo sapiens (Human)
(NCBI Taxonomy: 9606) |
| Sex of cell |
Male |
| Age at sampling |
68Y |
| Category |
Cancer cell line |
| STR profile |
Source(s): Direct_author_submission
Markers:| Amelogenin | X,Y |
| CSF1PO | 11,12 |
| D3S1358 | 15,17 |
| D5S818 | 9,12 |
| D7S820 | 9 |
| D8S1179 | 10,13 |
| D13S317 | 11 |
| D16S539 | 10,11 |
| D18S51 | 12,16 |
| D21S11 | 28,30 |
| FGA | 21 |
| Penta D | 8,9 |
| Penta E | 7 |
| TH01 | 9.3 |
| TPOX | 8,11 |
| vWA | 16 |
Run an STR similarity search on this cell line |
| Publications | CLPUB00518 Stephen J. Goldie; Studies of FRMD4A in two models of squamous cell carcinoma. Thesis PhD (2011); University of Cambridge; Cambridge; United Kingdom PubMed=27693639; DOI=10.1016/j.canlet.2016.09.014; PMCID=PMC5090049 Tyler F. Hayes, Nathan Benaich, Stephen J. Goldie, Kalle Sipila, Ashley Ames-Draycott, Wen-Jun Cai, Guang-Liang Yin, Fiona Mary Watt; Integrative genomic and functional analysis of human oral squamous cell carcinoma cell lines reveals synergistic effects of FAT1 and CASP8 inactivation. Cancer Lett. 383:106-114(2016) CLPUB00517 Ashley Jane Pritchard; Correlating genetic change with changes in cell behaviour in squamous cell carcinoma of the head and neck (SCCHN). Focus on inactivating NOTCH1 mutations. Thesis PhD (2018); King's College London; London; United Kingdom |
| Cross-references |
| Cell line databases/resources |
cancercelllines; CVCL_WV09
|
| Encyclopedic resources |
Wikidata; Q98132638
|
| Entry history |
| Entry creation | 05-Jul-2019 |
| Last entry update | 10-Apr-2025 |
| Version number | 12 |
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