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Cellosaurus (CVCL_VA19)

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Comments Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Part of: COSMIC cell lines project.
Part of: TCGA-110-CL cell line panel.
Population: Caucasian.
Microsatellite instability: Stable (MSS) (Sanger).
Omics: Genomics; DNA methylation analysis.
Omics: Genomics; Whole exome sequencing.
Omics: Phenotyping; Drug screening.
Omics: Proteomics; Quantitative.
Omics: Transcriptomics; Microarray.
Omics: Transcriptomics; RNAseq.
Omics: Variations; SNP array analysis.
Derived from site: In situ; Oral cavity, tongue; UBERON=UBERON_0001723.
Sequence variations
  • Mutation; HGNC; HGNC:11998; TP53; Simple; p.Val173_Arg174InsGly (c.518_520delTGA); Zygosity=Homozygous (PubMed=8390283; Cosmic-CLP=1290725; DepMap=ACH-000228).
HLA typing Source: PubMed=26589293
Class I
HLA-AA*32:01,32:01
HLA-BB*07:02,07:02
HLA-CC*07:02,07:02
Genome ancestry Source: PubMed=30894373

Origin% genome
African1.67
Native American0
East Asian, North1.96
East Asian, South0
South Asian0
European, North61.56
European, South34.81
Disease Tongue squamous cell carcinoma (NCIt: C4648)
Squamous cell carcinoma of the oral tongue (ORDO: Orphanet_457252)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Male
Age at sampling Age unspecified
Category Cancer cell line
STR profile Source(s): Cosmic-CLP=1290725; ECACC=04072107; PubMed=25877200

Markers:
AmelogeninX
CSF1PO9,14
D3S135815
D5S81813
D7S8208,12
D8S117913
D13S31712
D16S53911,12
D18S5116
D21S1128
FGA24
Penta D12
Penta E11
TH019
TPOX10
vWA18

Run an STR similarity search on this cell line
Publications



literature.
Cancer Res. 77:2784-2788(2017)


Tetsuhiro Kikuchi, Asuka Morizane, Daisuke Doi, Hiroaki Magotani, Hirotaka Onoe, Takuya Hayashi, Hiroshi Mizuma, Sayuki Takara, Ryosuke Takahashi, Haruhisa Inoue, Satoshi Morita ...Show all 16 authors... , Michio Yamamoto, Keisuke Okita, Masato Nakagawa, Malin Parmar, Jun Takahashi; Show fewer authors
Human iPS cell-derived dopaminergic neurons function in a primate Parkinson's disease model.
Nature 548:592-596(2017)


Thomas B. Hildebrandt, Robert Hermes, Silvia Colleoni, Sebastian Diecke, Susanne Holtze, Marilyn Bernice Renfree, Jan Stejskal, Katsuhiko Hayashi, Micha Drukker, Pasqualino Loi, Frank Goritz ...Show all 13 authors... , Giovanna Lazzari, Cesare Galli; Show fewer authors
Embryos and embryonic stem cells from the white rhinoceros.
Nat. Commun. 9:2589.1-2589.9(2018)




Cancer Cell 33:386-400.e5(2018)

Entry history
Entry creation04-Apr-2012
Last entry update10-Apr-2025
Version number37