| Comments |
Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Omics: Genomics; Whole exome sequencing.
Omics: Transcriptomics; Microarray.
Omics: Variations; SNP array analysis.
Miscellaneous: STR profile from personal communication of Garson, Kenneth.
Derived from site: Metastatic; Pelvis; UBERON=UBERON_0002355. |
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| Sequence variations |
- Mutation; HGNC; HGNC:11100; SMARCA4; Simple; c.2438+1G>A; ClinVar=VCV000537781; Zygosity=Heterozygous; Note=Splice donor mutation (PubMed=24658002; DepMap=ACH-001278).
- Mutation; HGNC; HGNC:11100; SMARCA4; Simple; c.2439-2A>T; Zygosity=Heterozygous; Note=Splice acceptor mutation (PubMed=24658002; DepMap=ACH-001278).
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| Disease |
Ovarian small cell carcinoma, hypercalcemic type (NCIt: C40439)
Small cell carcinoma of the ovary (ORDO: Orphanet_370396) |
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| Species of origin |
Homo sapiens (Human)
(NCBI Taxonomy: 9606) |
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| Sex of cell |
Female |
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| Age at sampling |
Age unspecified |
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| Category |
Cancer cell line |
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| STR profile |
Source(s): Direct_author_submission
Markers:| Amelogenin | X |
| CSF1PO | 10,12 |
| D2S1338 | 17,25 |
| D3S1358 | 15,19 |
| D5S818 | 11,12 |
| D7S820 | 9 |
| D8S1179 | 14 |
| D13S317 | 10,12 |
| D16S539 | 12 |
| D18S51 | 13,19 |
| D19S433 | 14,15.2 |
| D21S11 | 30 |
| FGA | 22,23 |
| TH01 | 6,9.3 |
| TPOX | 11 |
| vWA | 14,18 |
Run an STR similarity search on this cell line |
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| Publications |
J. Biotechnol. 156:227-235(2011)
Mauro Waldner, Pierre-Yves Le Pennec, Jean-Pierre Cartron, Lionel Arnaud;
Null alleles of ABCG2 encoding the breast cancer resistance protein define the new blood group system Junior.
Nat. Genet. 44:174-177(2012)
Kristy Anne Warner, Alexandra E. Herzog, Alexander T. Pearson, Zhao-Cheng Zhang, Wei-Shing Wu, Vasu Divi, Christie Rodriguez-Ramirez, Rogerio Moraes Castilho, Peter J. Polverini, Jacques Eduardo Nor;
UM-HACC-2A: MYB-NFIB fusion-positive human adenoid cystic carcinoma cell line.
Oral Oncol. 87:21-28(2018)
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| Entry history |
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| Entry creation | 03-Feb-2014 |
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| Last entry update | 10-Apr-2025 |
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| Version number | 22 |
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