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Cellosaurus SF8628 (CVCL_IT46)

[Text version]
Cell line name SF8628
Synonyms SF-8628
Accession CVCL_IT46
Resource Identification Initiative To cite this cell line use: SF8628 (RRID:CVCL_IT46)
Comments Omics: Genomics; ChIP-seq; H3K27ac.
Omics: Genomics; ChIP-seq; H3K27me3.
Omics: Transcriptomics; RNAseq.
Derived from site: In situ; Brainstem, pons; UBERON=UBERON_0000988.
Sequence variations
Disease Diffuse intrinsic pontine glioma (NCIt: C94764)
Diffuse intrinsic pontine glioma (ORDO: Orphanet_497188)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Female
Age at sampling 3Y
Category Cancer cell line
STR profile Source(s): Millipore=SCC127

Markers:
AmelogeninX
CSF1PO11,12
D3S135815,18
D5S81811,12
D7S82011
D8S117910,13
D13S3179
D16S5399
D18S5114
D21S1129,30
FGA19,22
Penta D11,12
Penta E11,13
TH017
TPOX8
vWA16,17

Run an STR similarity search on this cell line
Publications

PubMed=23603901; DOI=10.1101/gad.217778.113; PMCID=PMC3656328
Chan K.-M., Fang D., Gan H.-Y., Hashizume R., Yu C.-H., Schroeder M., Gupta N., Mueller S., James C.D., Jenkins R.B., Sarkaria J., Zhang Z.-G.
The histone H3.3K27M mutation in pediatric glioma reprograms H3K27 methylation and gene expression.
Genes Dev. 27:985-990(2013)

PubMed=24305702; DOI=10.1093/neuonc/not220; PMCID=PMC3922515
Mueller S., Hashizume R., Yang X.-D., Kolkowitz I., Olow A.K., Phillips J.J., Smirnov I., Tom M.W., Prados M.D., James C.D., Berger M.S., Gupta N., Haas-Kogan D.A.
Targeting Wee1 for the treatment of pediatric high-grade gliomas.
Neuro-oncol. 16:352-360(2014)

PubMed=25401693; DOI=10.1038/nm.3716; PMCID=PMC4257862
Hashizume R., Andor N., Ihara Y., Lerner R., Gan H.-Y., Chen X.-Y., Fang D., Huang X., Tom M.W., Ngo V., Solomon D.A., Mueller S., Paris P.L., Zhang Z.-G., Petritsch C.K., Gupta N., Waldman T.A., James C.D.
Pharmacologic inhibition of histone demethylation as a therapy for pediatric brainstem glioma.
Nat. Med. 20:1394-1396(2014)

PubMed=29760046; DOI=10.1158/0008-5472.CAN-17-3691; PMCID=PMC6294442
Pal S., Kozono D., Yang X.-D., Fendler W., Fitts W., Ni J., Alberta J.A., Zhao J., Liu K.X., Bian J., Truffaux N., Weiss W.A., Resnick A.C., Bandopadhayay P., Ligon K.L., DuBois S.G., Mueller S., Chowdhury D., Haas-Kogan D.A.
Dual HDAC and PI3K inhibition abrogates NFkappaB- and FOXM1-mediated DNA damage response to radiosensitize pediatric high-grade gliomas.
Cancer Res. 78:4007-4021(2018)

PubMed=34078608; DOI=10.1126/sciadv.abg4126; PMCID=PMC10166578
Wang J., Huang T.Y.-T., Hou Y., Bartom E.T., Lu X.-Y., Shilatifard A., Yue F., Saratsis A.M.
Epigenomic landscape and 3D genome structure in pediatric high-grade glioma.
Sci. Adv. 7:eabg4126.1-eabg4126.16(2021)

Cross-references
Cell line collections (Providers) Millipore; SCC127
Cell line databases/resources cancercelllines; CVCL_IT46
Encyclopedic resources Wikidata; Q54952963
Gene expression databases GEO; GSE59366
GEO; GSE59496
GEO; GSM1508949
GEO; GSM1508952
GEO; GSM4969608
GEO; GSM4969609
GEO; GSM4969610
GEO; GSM4969611
GEO; GSM4969616
GEO; GSM4969646
GEO; GSM4969647
GEO; GSM4969648
Polymorphism and mutation databases Cosmic; 1925953
Entry history
Entry creation03-Mar-2017
Last entry update10-Apr-2025
Version number15