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Cellosaurus EPC-EC-Vip-C11 (CVCL_E3AK)

[Text version]
Cell line name EPC-EC-Vip-C11
Accession CVCL_E3AK
Resource Identification Initiative To cite this cell line use: EPC-EC-Vip-C11 (RRID:CVCL_E3AK)
Comments Group: Fish cell line.
Problematic cell line: Misidentified. Grand-parent cell line (EPC) was originally deposited as a carp (Cyprinus carpio) cell line, is in fact a fathead minnow (Pimephales promelas) cell line.
Characteristics: The parent cell line was transiently transfected with a mix of sgRNAs designed against stat2 and against mEGFP. mEGFP-deficient cells were isolated (PubMed=38951796).
Knockout cell: Method=CRISPR/Cas9; UniProtKB; A0A096ZN79; Viperin (Vig1).
Genetic integration: Method=Transfection; Gene=FPbase; R9NL8; eGFP (Note=Enhanced GFP).
Genetic integration: Method=Transfection; Gene=UniProtKB; Q99ZW2; Streptomyces pyogenes Cas9 (Note=Nuclear version; nCas9n).
Genetic integration: Method=Transfection; Gene=UniProtKB; P00557; Escherichia coli hygromycin-B 4-O-kinase (hph) (HygR).
Genetic integration: Method=Transfection; Gene=UniProtKB; P00552; Klebsiella pneumoniae transposon Tn5 neo.
Cell type: Epithelial cell; CL=CL_0000066.
Species of origin Pimephales promelas (Fathead minnow) (NCBI Taxonomy: 90988)
Hierarchy Parent: CVCL_E3AG (EPC-EC)
Sex of cell Sex unspecified
Age at sampling Age unspecified
Category Spontaneously immortalized cell line
Publications

PubMed=38951796; DOI=10.1186/s12864-024-10566-x; PMCID=PMC11218377
Lise Chaumont, Luc Jouneau, Francois Huetz, Doret R. van Muilekom, Mathilde Peruzzi, Claudine Raffy, Jerome Le Hir, Jules Maarten H.M. Minke, Pierre Boudinot, Bertrand Collet;
Unexpected regulatory functions of cyprinid viperin on inflammation and metabolism.
BMC Genomics 25:650.1-650.28(2024)

Entry history
Entry creation10-Sep-2024
Last entry update14-Aug-2025
Version number3