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Cellosaurus 585A1 (CVCL_DQ06)

[Text version]
Cell line name 585A1
Synonyms HPS0354
Accession CVCL_DQ06
Resource Identification Initiative To cite this cell line use: 585A1 (RRID:CVCL_DQ06)
Comments From: Center for iPS Cell Research and Application, Kyoto University; Kyoto; Japan.
Population: Japanese.
Omics: Genomics; DNA methylation analysis.
Omics: Proteomics.
Omics: Transcriptomics; Microarray.
Omics: Transcriptomics; RNAseq.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
HLA typing Source: PubMed=30853558
Class I
HLA-AA*24:02
HLA-BB*07:02,52:01
HLA-CC*07:02,12:02
Class II
HLA-DRDRB1*01:01,15:01
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Children:
CVCL_VS01 (23C27)CVCL_C1FM (585A1-B2M-KO)CVCL_C1FZ (585A1-C7 #3-1)
CVCL_C1G0 (585A1-C7 #3-3)
Originate from same individual CVCL_DQ07 ! 585B1
CVCL_DQ20 ! 692D2
CVCL_LJ36 ! 692E1
CVCL_DQ21 ! 703A1
CVCL_DQ22 ! 703B1
Sex of cell Male
Age at sampling 30-39Y
Category Induced pluripotent stem cell
Publications

PubMed=22802639; DOI=10.1073/pnas.1209979109; PMCID=PMC3411998
Masatoshi Kajiwara, Takashi Aoi, Keisuke Okita, Ryosuke Takahashi, Haruhisa Inoue, Naoya Takayama, Hiroshi Endo, Koji Eto, Junya Toguchida, Shinji Uemoto, Shinya Yamanaka;
Donor-dependent variations in hepatic differentiation from human-induced pluripotent stem cells.
Proc. Natl. Acad. Sci. U.S.A. 109:12538-12543(2012)

PubMed=23193063; DOI=10.1002/stem.1293
Keisuke Okita, Tatsuya Yamakawa, Yasuko Matsumura, Yoshiko Sato, Naoki Amano, Akira Watanabe, Naoki Goshima, Shinya Yamanaka;
An efficient nonviral method to generate integration-free human-induced pluripotent stem cells from cord blood and peripheral blood cells.
Stem Cells 31:458-466(2013)

PubMed=23210603; DOI=10.1021/pr300837u
Ryota Yamana, Mio Iwasaki, Masaki Wakabayashi, Masato Nakagawa, Shinya Yamanaka, Yasushi Ishihama;
Rapid and deep profiling of human induced pluripotent stem cell proteome by one-shot NanoLC-MS/MS analysis with meter-scale monolithic silica columns.
J. Proteome Res. 12:214-221(2013)

PubMed=24259714; DOI=10.1073/pnas.1319061110; PMCID=PMC3870695
Michiyo Koyanagi-Aoi, Mari Ohnuki, Kazutoshi Takahashi, Keisuke Okita, Hisashi Noma, Yuka Sawamura, Ito Teramoto, Megumi Narita, Yoshiko Sato, Tomoko Ichisaka, Naoki Amano ...Show all 17 authors... , Akira Watanabe, Asuka Morizane, Yasuhiro Yamada, Tosiya Sato, Jun Takahashi, Shinya Yamanaka; Show fewer authors
Differentiation-defective phenotypes revealed by large-scale analyses of human pluripotent stem cells.
Proc. Natl. Acad. Sci. U.S.A. 110:20569-20574(2013)

PubMed=25665923; DOI=10.1016/j.scr.2015.01.007
Taro Toyoda, Shin-ichi Mae, Hiromi Tanaka, Yasushi Kondo, Michinori Funato, Yositaka Hosokawa, Tomomi Sudo, Yoshiya Kawaguchi, Kenji Osafune;
Cell aggregation optimizes the differentiation of human ESCs and iPSCs into pancreatic bud-like progenitor cells.
Stem Cell Res. 14:185-197(2015)

PubMed=26189426; DOI=10.1016/j.stem.2015.06.014
Kotaro Sasaki, Shihori Yokobayashi, Tomonori Nakamura, Ikuhiro Okamoto, Yukihiro Yabuta, Kazuki Kurimoto, Hiroshi Ohta, Yoshinobu Moritoki, Chizuru Iwatani, Hideaki Tsuchiya, Shinichiro Nakamura ...Show all 21 authors... , Kiyotoshi Sekiguchi, Tetsushi Sakuma, Takashi Yamamoto, Takahide Mori, Knut Woltjen, Masato Nakagawa, Takuya Yamamoto, Kazutoshi Takahashi, Shinya Yamanaka, Mitinori Saitou; Show fewer authors
Robust in vitro induction of human germ cell fate from pluripotent stem cells.
Cell Stem Cell 17:178-194(2015)

PubMed=27476965; DOI=10.1016/j.stem.2016.06.019
Masatoshi Nishizawa, Kazuhisa Chonabayashi, Masaki Nomura, Azusa Tanaka, Masahiro Nakamura, Azusa Inagaki, Misato Nishikawa, Ikue Takei, Akiko Oishi, Koji Tanabe, Mari Ohnuki ...Show all 18 authors... , Hidaka Yokota, Michiyo Koyanagi-Aoi, Keisuke Okita, Akira Watanabe, Akifumi Takaori-Kondo, Shinya Yamanaka, Yoshinori Yoshida; Show fewer authors
Epigenetic variation between human induced pluripotent stem cell lines is an indicator of differentiation capacity.
Cell Stem Cell 19:341-354(2016)

PubMed=28453617; DOI=10.1093/biolre/iox038
Shihori Yokobayashi, Keisuke Okita, Masato Nakagawa, Tomonori Nakamura, Yukihiro Yabuta, Takuya Yamamoto, Mitinori Saitou;
Clonal variation of human induced pluripotent stem cells for induction into the germ cell fate.
Biol. Reprod. 96:1154-1166(2017)

PubMed=30735882; DOI=10.1016/j.scr.2019.101400
Satoshi Matsui, Miyuki Ochiai, Katsutaro Yasuda, Shin-ichi Mae, Maki Kotaka, Taro Toyoda, Takuya Yamamoto, Kenji Osafune;
Differentiation and isolation of iPSC-derived remodeling ductal plate-like cells by use of an AQP1-GFP reporter human iPSC line.
Stem Cell Res. 35:101400-101400(2019)

PubMed=30853558; DOI=10.1016/j.stem.2019.02.005
Huai-Geng Xu, Bo Wang, Miyuki Ono, Akihiro Kagita, Kaho Fujii, Noriko Sasakawa, Tatsuki Ueda, Peter Gee, Misato Nishikawa, Masaki Nomura, Fumiyo Kitaoka ...Show all 16 authors... , Tomoko Takahashi, Keisuke Okita, Yoshinori Yoshida, Shin Kaneko, Akitsu Hotta; Show fewer authors
Targeted disruption of HLA genes via CRISPR-Cas9 generates iPSCs with enhanced immune compatibility.
Cell Stem Cell 24:566-578.e7(2019)

Patent=US20200407693
Akitsu Hotta, Huai-Geng Xu, Shin Kaneko, Bo Wang;
Method for producing low-antigenic cell.
Patent number US20200407693, 31-Dec-2020

Cross-references
Cell line collections (Providers) RCB; HPS0354
Cell line databases/resources SKIP; SKIP000858
Encyclopedic resources Wikidata; Q54603888
Gene expression databases GEO; GSM1040279
GEO; GSM1040349
GEO; GSM1489230
GEO; GSM1489447
GEO; GSM2152683
GEO; GSM2152684
GEO; GSM2152685
GEO; GSM2152686
GEO; GSM2152687
GEO; GSM2152688
GEO; GSM2152689
GEO; GSM2152690
GEO; GSM2592208
GEO; GSM2592209
Proteomic databases PRIDE; PXD000071
Entry history
Entry creation13-Jul-2016
Last entry update10-Apr-2025
Version number11