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Cellosaurus HDF1388 (CVCL_DP59)

[Text version]
Cell line name HDF1388
Synonyms HDF-1388; aHDF1388; 1388
Accession CVCL_DP59
Resource Identification Initiative To cite this cell line use: HDF1388 (RRID:CVCL_DP59)
Comments From: Cell Applications, Inc.; San Diego; USA.
Population: Caucasian.
Omics: Deep proteome analysis.
Omics: DNA methylation analysis.
Omics: Transcriptome analysis by microarray.
Derived from site: In situ; Skin, dermis; UBERON=UBERON_0002067.
Cell type: Fibroblast of skin; CL=CL_0002620.
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Children:
CVCL_A062 (201B1)CVCL_A063 (201B2)CVCL_A064 (201B3)
CVCL_A065 (201B6)CVCL_A324 (201B7)CVCL_C237 (246B1)
CVCL_C238 (246B2)CVCL_C239 (246B3)CVCL_C240 (246B4)
CVCL_C241 (246B5)CVCL_C242 (246B6)CVCL_B513 (253F1)
CVCL_B514 (253F2)CVCL_B515 (253F3)CVCL_B516 (253F4)
CVCL_B517 (253F5)CVCL_B518 (253G1)CVCL_T792 (253G4)
CVCL_DQ51 (32R1)CVCL_DQ52 (32R2)CVCL_DQ53 (32R6)
CVCL_DP92 (404C2)CVCL_K092 (409B2)CVCL_DP60 (414C2)
CVCL_VG20 (7H10 [Human iPSC])CVCL_VG22 (7H2)CVCL_VG21 (7H5)
CVCL_VG23 (7H8)CVCL_VG24 (7H9)CVCL_RI44 (836B3)
CVCL_F178 (GM23279)CVCL_F179 (GM23280)CVCL_LJ40 (WA29)
CVCL_VG19 (XH1 [Human iPSC])
Sex of cell Female
Age at sampling 36Y
Category Finite cell line
STR profile Source(s): PubMed=18035408; PubMed=21460823

CSF1PO10 (PubMed=18035408)
11 (PubMed=21460823)
D3S135815,17 (PubMed=18035408)
16,18 (PubMed=21460823)
D5S81811 (PubMed=18035408)
12 (PubMed=21460823)
D13S3179,13 (PubMed=21460823)
10,14 (PubMed=18035408)
D18S5114 (PubMed=18035408)
15 (PubMed=21460823)
D21S1128 (PubMed=18035408)
29 (PubMed=21460823)
Penta D8,10 (PubMed=18035408)
9,11 (PubMed=21460823)
Penta E7,19
TH015 (PubMed=18035408)
6 (PubMed=21460823)

Run an STR similarity search on this cell line

PubMed=18035408; DOI=10.1016/j.cell.2007.11.019
Takahashi K., Tanabe K., Ohnuki M., Narita M., Ichisaka T., Tomoda K., Yamanaka S.
Induction of pluripotent stem cells from adult human fibroblasts by defined factors.
Cell 131:861-872(2007)

PubMed=19956543; DOI=10.1371/journal.pone.0008067
Takahashi K., Narita M., Yokura M., Ichisaka T., Yamanaka S.
Human induced pluripotent stem cells on autologous feeders.
PLoS ONE 4:E8067-E8067(2009)

PubMed=21460823; DOI=10.1038/nmeth.1591
Okita K., Matsumura Y., Sato Y., Okada A., Morizane A., Okamoto S., Hong H.-J., Nakagawa M., Tanabe K., Tezuka K.-i., Shibata T., Kunisada T., Takahashi M., Takahashi J., Saji H., Yamanaka S.
A more efficient method to generate integration-free human iPS cells.
Nat. Methods 8:409-412(2011)

PubMed=23210603; DOI=10.1021/pr300837u
Yamana R., Iwasaki M., Wakabayashi M., Nakagawa M., Yamanaka S., Ishihama Y.
Rapid and deep profiling of human induced pluripotent stem cell proteome by one-shot NanoLC-MS/MS analysis with meter-scale monolithic silica columns.
J. Proteome Res. 12:214-221(2013)

PubMed=24259714; DOI=10.1073/pnas.1319061110
Koyanagi-Aoi M., Ohnuki M., Takahashi K., Okita K., Noma H., Sawamura Y., Teramoto I., Narita M., Sato Y., Ichisaka T., Amano N., Watanabe A., Morizane A., Yamada Y., Sato T., Takahashi J., Yamanaka S.
Differentiation-defective phenotypes revealed by large-scale analyses of human pluripotent stem cells.
Proc. Natl. Acad. Sci. U.S.A. 110:20569-20574(2013)

Encyclopedic resources Wikidata; Q28245330
Gene expression databases GEO; GSM1040299
GEO; GSM1040369
GEO; GSM1493702
Proteomic databases PRIDE; PXD000071
Entry history
Entry creation13-Jul-2016
Last entry update29-Jun-2023
Version number8