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Cellosaurus JN-DSRCT-1 (CVCL_9W68)

[Text version]
Cell line name JN-DSRCT-1
Synonyms JN-DSRCT
Accession CVCL_9W68
Resource Identification Initiative To cite this cell line use: JN-DSRCT-1 (RRID:CVCL_9W68)
Comments Population: Japanese.
Doubling time: ~38 hours (PubMed=12218078); 22 hours (PubMed=34841430).
Derived from site: Metastatic; Pleural effusion; UBERON=UBERON_0000175.
Sequence variations
  • Gene fusion; HGNC; 3508; EWSR1 + HGNC; 12796; WT1; Name(s)=EWSR1-WT1, EWS-WT1; Note=EWSR1 Ex10-WT1 Ex8 fusion (PubMed=12218078; PubMed=34841430).
  • Mutation; HGNC; 2348; CREBBP; Simple; p.Arg1443Alafs*11; Zygosity=Unspecified (PubMed=34841430).
  • Mutation; HGNC; 4172; GATA3; Simple; p.Arg367Ter (c.1099C>T); ClinVar=VCV000016626; Zygosity=Unspecified (PubMed=34841430).
  • Mutation; HGNC; 9884; RB1; Simple; p.Arg621Ser (c.1861C>A); ClinVar=VCV000135120; Zygosity=Unspecified (PubMed=34841430).
Disease Childhood desmoplastic small round cell tumor (NCIt: C27372)
Desmoplastic small round cell tumor (ORDO: Orphanet_83469)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Children:
CVCL_C6N7 (JN-DSRCT-SLFN11-KO)
Sex of cell Male
Age at sampling 7Y
Category Cancer cell line
Publications

PubMed=12218078; DOI=10.1097/01.LAB.0000028059.92642.03
Nishio J., Iwasaki H., Ishiguro M., Ohjimi Y., Fujita C., Yanai F., Nibu K., Mitsudome A., Kaneko Y., Kikuchi M.
Establishment and characterization of a novel human desmoplastic small round cell tumor cell line, JN-DSRCT-1.
Lab. Invest. 82:1175-1182(2002)

PubMed=15782132; DOI=10.1038/sj.onc.1208471
Tirado O.M., Mateo-Lozano S., Notario V.
Rapamycin induces apoptosis of JN-DSRCT-1 cells by increasing the Bax:Bcl-xL ratio through concurrent mechanisms dependent and independent of its mTOR inhibitory activity.
Oncogene 24:3348-3357(2005)

PubMed=22142829; DOI=10.1158/1078-0432.CCR-11-2056
Shukla N., Ameur N., Yilmaz I., Nafa K., Lau C.-Y., Marchetti A., Borsu L., Barr F.G., Ladanyi M.
Oncogene mutation profiling of pediatric solid tumors reveals significant subsets of embryonal rhabdomyosarcoma and neuroblastoma with mutated genes in growth signaling pathways.
Clin. Cancer Res. 18:748-757(2012)

PubMed=34413129; DOI=10.1158/1535-7163.MCT-21-0089
Gartrell J., Mellado-Largarde M., Clay M.R., Bahrami A., Sahr N.A., Sykes A., Blankenship K., Hoffmann L., Xie J., Cho H.P., Twarog N., Connelly M., Yan K.-K., Yu J.-Y., Porter S.N., Pruett-Miller S.M., Neale G., Tinkle C.L., Federico S.M., Stewart E.A., Shelat A.A.
SLFN11 is widely expressed in pediatric sarcoma and induces variable sensitization to replicative stress caused by DNA-damaging agents.
Mol. Cancer Ther. 20:2151-2165(2021)

PubMed=34841430; DOI=10.1242/dmm.047621
Smith R.S., Odintsov I., Liu Z.-B., Lui A.J.-W., Hayashi T., Vojnic M., Suehara Y., Delasos L., Mattar M.S., Hmeljak J., Ramirez H.A., Shaw M., Bui G., Hartono A.B., Gladstone E., Kunte S., Magnan H., Khodos I., de Stanchina E., La Quaglia M.P., Yao J.-J., Lae M., Lee S.B., Spraggon L., Pratilas C.A., Ladanyi M., Somwar R.
Novel patient-derived models of DSRCT enable validation of ERBB signaling as a potential therapeutic vulnerability.
Dis. Model. Mech. 15:dmm047621.1-dmm047621.15(2022)

Cross-references
Cell line databases/resources cancercelllines; CVCL_9W68
Encyclopedic resources Wikidata; Q54899015
Polymorphism and mutation databases Cosmic; 1718818
Entry history
Entry creation23-Feb-2016
Last entry update05-Oct-2023
Version number13