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Cellosaurus VACO 400 (CVCL_5400)

[Text version]
Cell line name VACO 400
Synonyms Vaco 400; VACO-400; Vaco-400; VACO400; Vaco400; V400
Accession CVCL_5400
Resource Identification Initiative To cite this cell line use: VACO 400 (RRID:CVCL_5400)
Comments Microsatellite instability: Stable (MSS) (PubMed=9927040).
Derived from site: Metastatic; Liver; UBERON=UBERON_0002107.
Sequence variations
  • Mutation; HGNC; HGNC:1148; BUB1; Unexplicit; IVS4+1G>A; Zygosity=Unspecified; Note=Splice donor mutation (PubMed=15162061).
  • Mutation; HGNC; HGNC:16627; CHEK2; Simple; p.Thr45Thr (c.135G>A); ClinVar=VCV000186358; Zygosity=Heterozygous (PubMed=18167186).
  • Mutation; HGNC; HGNC:11773; TGFBR2; Simple; p.Lys52Thr (c.155A>C); Zygosity=Heterozygous (PubMed=9927040).
  • Mutation; HGNC; HGNC:11773; TGFBR2; Simple; p.Tyr470Asp (c.1408T>G); ClinVar=VCV000217016; Zygosity=Heterozygous (PubMed=9927040).
  • Mutation; HGNC; HGNC:11998; TP53; Simple; c.74+2T>C; Zygosity=Unspecified; Note=Splice donor mutation (PubMed=16418264).
Disease Colon carcinoma (NCIt: C4910)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Male
Age at sampling 54Y
Category Cancer cell line
Web pages Info; Pawefish; -; https://www.cellosaurus.org/pawefish/ColonCellLineDescriptions/VACO400.html
Publications

PubMed=9927040
William M. Grady, Lois Lemmermann Myeroff, Sandra E. Swinler, Ashwani Rajput, Sam Thiagalingam, James D. Lutterbaugh, Aaron Neumann, Michael G. Brattain, Jay Chang, Seong-Jin Kim, Kenneth Wayne Kinzler ...Show all 14 authors... , Bert Vogelstein, James K.V. Willson, Sanford David Markowitz; Show fewer authors
Mutational inactivation of transforming growth factor beta receptor type II in microsatellite stable colon cancers.
Cancer Res. 59:320-324(1999)

PubMed=15162061; DOI=10.1159/000077512
Mira Grigorova, Joanne M. Staines, Hilal Ozdag, Carlos Caldas, Paul A.W. Edwards;
Possible causes of chromosome instability: comparison of chromosomal abnormalities in cancer cell lines with mutations in BRCA1, BRCA2, CHK2 and BUB1.
Cytogenet. Genome Res. 104:333-340(2004)

PubMed=16418264; DOI=10.1073/pnas.0510146103; PMCID=PMC1327731
Ying Liu, Walter Fred Bodmer;
Analysis of p53 mutations and their expression in 56 colorectal cancer cell lines.
Proc. Natl. Acad. Sci. U.S.A. 103:976-981(2006)

PubMed=18167186; DOI=10.5555/cmj.0366-6999.120.23.p2119.01
Wei-Dong Liu, Bai-Yun Zhong, Yang-De Zhang, Gyu-Seog Choi;
Mutation analysis of the checkpoint kinase 2 gene in colorectal cancer cell lines.
Chin. Med. J. 120:2119-2123(2007)

PubMed=20606684; DOI=10.1038/sj.bjc.6605780; PMCID=PMC2920028
Karin Bracht, Angela M. Nicholls, Ying Liu, Walter Fred Bodmer;
5-fluorouracil response in a large panel of colorectal cancer cell lines is associated with mismatch repair deficiency.
Br. J. Cancer 103:340-346(2010)

Cross-references
Cell line databases/resources cancercelllines; CVCL_5400
Anatomy/cell type resources BTO; BTO_0004764
Encyclopedic resources Wikidata; Q54992719
Gene expression databases GEO; GSM784046
Polymorphism and mutation databases Cosmic; 1312318
Cosmic; 2647362
IARC_TP53; 21757
Progenetix; CVCL_5400
Entry history
Entry creation04-Apr-2012
Last entry update10-Apr-2025
Version number23