Cellosaurus logo
expasy logo

Cellosaurus AP39P (CVCL_XD42)

[Text version]
Cell line name AP39P
Synonyms N0611
Accession CVCL_XD42
Resource Identification Initiative To cite this cell line use: AP39P (RRID:CVCL_XD42)
Comments Population: Japanese.
Derived from site: In situ; Skin; UBERON=UBERON_0002097.
Cell type: Fibroblast of skin; CL=CL_0002620.
Sequence variations
  • Mutation; HGNC; HGNC:253; ADH5; Simple; c.564+1G>A (p.Leu188Profs*4); ClinVar=VCV000995826; Zygosity=Heterozygous; Note=Splice donor mutation (PubMed=33355142).
  • Mutation; HGNC; HGNC:253; ADH5; Simple; p.Ala278Pro (c.832G>C); ClinVar=VCV000995827; Zygosity=Heterozygous (PubMed=33355142).
  • Mutation; HGNC; HGNC:404; ALDH2; Simple; p.Glu504Lys (c.1510G>A) (p.Glu487Lys); ClinVar=VCV000018390; Zygosity=Heterozygous; Note=Allele ALDH2*2 (PubMed=33355142).
Disease AMeD syndrome (NCIt: C185246)
Aplastic anemia-intellectual disability-dwarfism syndrome (ORDO: Orphanet_611216)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Children:
CVCL_B5M2 (AP39P-iPSC#1)CVCL_B5M4 (AP39P-iPSC#2)CVCL_XD43 (AP39P(SVT))
Originate from same individual CVCL_XD44 ! AP39P(L)
Sex of cell Female
Age at sampling 10Y
Category Finite cell line
STR profile Source(s): JCRB=JCRB3068

Markers:
AmelogeninX
CSF1PO11,12
D5S8189,11
D7S8209,10
D13S31710,12
D16S53910,12
TH016,9
TPOX8,11
vWA16,17

Run an STR similarity search on this cell line
Publications

PubMed=33355142; DOI=10.1126/sciadv.abd7197; PMCID=PMC11206199
Yasuyoshi Oka, Motoharu Hamada, Yuka Nakazawa, Hideki Muramatsu, Yusuke Okuno, Koichiro Higasa, Mayuko Shimada, Honoka Takeshima, Katsuhiro Hanada, Taichi Hirano, Toshiro Kawakita ...Show all 41 authors... , Hirotoshi Sakaguchi, Takuya Ichimura, Shuichi Ozono, Kotaro Yuge, Yoriko Watanabe, Yuko Kotani, Mutsumi Yamane, Yumiko Kasugai, Miyako Tanaka, Takayoshi Suganami, Shinichiro Nakada, Norisato Mitsutake, Yuichiro Hara, Kohji Kato, Seiji Mizuno, Noriko Miyake, Yosuke Kawai, Katsushi Tokunaga, Masao Nagasaki, Seiji Kito, Keiichi Isoyama, Masafumi Onodera, Hideo Kaneko, Naomichi Matsumoto, Fumihiko Matsuda, Keitaro Matsuo, Yoshiyuki Takahashi, Tomoji Mashimo, Seiji Kojima, Tomoo Ogi; Show fewer authors
Digenic mutations in ALDH2 and ADH5 impair formaldehyde clearance and cause a multisystem disorder, AMeD syndrome.
Sci. Adv. 6:eabd7197.1-eabd7197.15(2020)

PubMed=33512438; DOI=10.1182/blood.2020009111
An-Feng Mu, Asuka Hira, Akira Niwa, Mitsujiro Osawa, Kenichi Yoshida, Minako Mori, Yusuke Okamoto, Kazuko Inoue, Keita Kondo, Masato T. Kanemaki, Tomonari Matsuda ...Show all 19 authors... , Etsuro Ito, Seiji Kojima, Tatsutoshi Nakahata, Seishi Ogawa, Keigo Tanaka, Keitaro Matsuo, Megumu K. Saito, Minoru Takata; Show fewer authors
Analysis of disease model iPSCs derived from patients with a novel Fanconi anemia-like IBMFS ADH5/ALDH2 deficiency.
Blood 137:2021-2032(2021)

Cross-references
Cell line collections (Providers) JCRB; JCRB3068
JCRB; KURB1642
Encyclopedic resources Wikidata; Q93325548
Entry history
Entry creation06-Sep-2019
Last entry update19-Dec-2024
Version number9