Cellosaurus cell line CHSA0108 (CVCL

Cellosaurus CHSA0108 (CVCL_X484)

[Text version]

Cell line name

CHSA0108

Synonyms

CHSA 0108

Accession

CVCL_X484

Resource Identification Initiative

To cite this cell line use: CHSA0108 (RRID:CVCL_X484)

Comments

Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Part of: COSMIC cell lines project.
Population: Caucasian.
Microsatellite instability: Stable (MSS) (Sanger).
Omics: Genomics; Whole exome sequencing.
Omics: Phenotyping; Drug screening.
Omics: Proteomics; Quantitative.
Omics: Transcriptomics; Microarray.

Genome ancestry

Source: PubMed=30894373

Origin	% genome
African	2.14
Native American	0.79
East Asian, North	1.29
East Asian, South	0
South Asian	0
European, North	63.46
European, South	32.32

Disease

Chondrosarcoma (NCIt: C2946)
Chondrosarcoma (ORDO: Orphanet_55880)

Species of origin

Homo sapiens (Human) (NCBI Taxonomy: 9606)

Sex of cell

Male

Category

Cancer cell line

STR profile

Source(s): Cosmic-CLP=1290768

Markers:

Amelogenin	X,Y
CSF1PO	11,13
D5S818	12,13
D7S820	9,10
D13S317	8,12
D16S539	9,13
TH01	6,9.3
TPOX	8,12
vWA	16,17

Publications

PubMed=27397505; DOI=10.1016/j.cell.2016.06.017; PMCID=PMC4967469
Francesco Iorio, Theo A. Knijnenburg, Daniel J. Vis, Graham Robert Bignell, Michael Patrick Menden, Michael Schubert, Nanne Aben, Emanuel Goncalves, Syd Barthorpe, Howard Lightfoot, Thomas Cokelaer ...Show all 39 authors... , Patricia Greninger, Ewald van Dyk, Han Chang, Heshani de Silva, Holger Heyn, Xian-Ming Deng, Regina K. Egan, Qing-Song Liu, Tatiana Mironenko, Xeni Mitropoulos, Laura Richardson, Jin-Hua Wang, Ting-Hu Zhang, Sebastian Moran, Sergi Sayols, Maryam Soleimani, David Tamborero, Nuria Lopez-Bigas, Petra Ross-Macdonald, Manel Esteller, Nathanael S. Gray, Daniel Arie Haber, Michael Rudolf Stratton, Cyril Henri Benes, Lodewyk F.A. Wessels, Julio Saez-Rodriguez, Ultan McDermott, Mathew J. Garnett; Show fewer authors
A landscape of pharmacogenomic interactions in cancer.
Cell 166:740-754(2016)

PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747; PMCID=PMC6445675
Julie Dutil, Zhi-Hua Chen, Alvaro N.A. Monteiro, Jamie K. Teer, Steven A. Eschrich;
An interactive resource to probe genetic diversity and estimated ancestry in cancer cell lines.
Cancer Res. 79:1263-1273(2019)

PubMed=35839778; DOI=10.1016/j.ccell.2022.06.010; PMCID=PMC9387775
Emanuel Goncalves, Rebecca C. Poulos, Zhao-Xiang Cai, Syd Barthorpe, Srikanth S. Manda, Natasha Lucas, Alexandra Beck, Daniel Bucio-Noble, Michael Dausmann, Caitlin Hall, Michael Hecker ...Show all 32 authors... , Jennifer Koh, Howard Lightfoot, Sadia Mahboob, Iman Mali, James Morris, Laura Richardson, Akila J. Seneviratne, Rebecca Shepherd, Erin Sykes, Frances Thomas, Sara Valentini, Steven G. Williams, Yang-Xiu Wu, Dylan Xavier, Karen L. MacKenzie, Peter G. Hains, Brett Tully, Phillip James Robinson, Qing Zhong, Mathew J. Garnett, Roger Robert Reddel; Show fewer authors
Pan-cancer proteomic map of 949 human cell lines.
Cancer Cell 40:835-849.e8(2022)

Cross-references

Cell line databases/resources

cancercelllines; CVCL_X484
Cell_Model_Passport; SIDM00050
Cosmic-CLP; 1290768
DepMap; ACH-002093

Chemistry resources

GDSC; 1290768
PharmacoDB; CHSA0108_202_2019

Encyclopedic resources

Wikidata; Q54813311

Gene expression databases

ArrayExpress; E-MTAB-3610

Proteomic databases

PRIDE; PXD030304

Sequence databases