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Cellosaurus ORL-196 (CVCL_VJ44)

[Text version]
Cell line name ORL-196
Synonyms ORL-196T; 196T
Accession CVCL_VJ44
Resource Identification Initiative To cite this cell line use: ORL-196 (RRID:CVCL_VJ44)
Comments Population: Indian.
Omics: Transcriptomics; RNAseq.
Derived from site: In situ; Oral cavity, buccal mucosa; UBERON=UBERON_0006956.
Sequence variations
  • Mutation; HGNC; HGNC:1787; CDKN2A; Simple; p.Arg80Ter (c.238C>T) (p.Pro94Leu, c.281C>T); ClinVar=VCV000009409; Zygosity=Homozygous (PubMed=27050151).
  • Mutation; HGNC; HGNC:3595; FAT1; Simple; p.Leu398Phefs*6 (c.1193dup); Zygosity=Unspecified (PubMed=27050151).
  • Mutation; HGNC; HGNC:11998; TP53; Simple; p.Lys321Asnfs*24 (c.960delG); Zygosity=Unspecified (PubMed=24224046; PubMed=27050151).
Disease Buccal mucosa squamous cell carcinoma (NCIt: C4040)
Squamous cell carcinoma of the oral cavity (ORDO: Orphanet_502363)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Female
Age at sampling 59Y
Category Cancer cell line
STR profile Source(s): PubMed=27050151

Markers:
AmelogeninX
CSF1PO10,12
D2S133822,23
D3S135814,17
D5S81813,14
D7S8208
D8S117913,15
D13S31712
D16S53912,13
D18S5115
D19S43314.2,16
D21S1129,32.2
FGA21,22
TH016,7
TPOX8,11
vWA14,16

Run an STR similarity search on this cell line
Publications

PubMed=24224046; DOI=10.1371/journal.pone.0080229; PMCID=PMC3817115
Sharifah Nurain Syed Zanaruddin, Pei-San Yee, Seen Yii Hor, Yink Heay Kong, Wan Maria Nabillah Wan Abd Ghani, Wan Mahadzir Wan Mustafa, Rosnah Binti Zain, Stephen S. Prime, Zainal Ariff Abdul Rahman, Sok-Ching Cheong;
Common oncogenic mutations are infrequent in oral squamous cell carcinoma of Asian origin.
PLoS ONE 8:e80229.1-e80229.12(2013)

PubMed=27050151; DOI=10.18632/oncotarget.8533; PMCID=PMC5053689
Muhammad Zaki Hidayatullah Fadlullah, Ivy Kim-Ni Chiang, Kalen R. Dionne, Pei-San Yee, Chai Phei Gan, Kin Kit Sam, Kai Hung Tiong, Adrian Kwok Wen Ng, Daniel Martin, Kue Peng Lim, Thomas George Kallarakkal ...Show all 21 authors... , Wan Mahadzir Wan Mustafa, Shin Hin Lau, Mannil Thomas Abraham, Rosnah Binti Zain, Zainal Ariff Abdul Rahman, Alfredo Alberto Molinolo, Vyomesh Patel, J. Silvio Gutkind, Aik-Choon Tan, Sok-Ching Cheong; Show fewer authors
Genetically-defined novel oral squamous cell carcinoma cell lines for the development of molecular therapies.
Oncotarget 7:27802-27818(2016)

Cross-references
Cell line databases/resources cancercelllines; CVCL_VJ44
Encyclopedic resources Wikidata; Q98128364
Polymorphism and mutation databases Cosmic; 2531646
Cosmic; 2559744
Entry history
Entry creation07-Sep-2018
Last entry update10-Apr-2025
Version number10