Cell line name |
ORL-196 |
Synonyms |
ORL-196T; 196T |
Accession |
CVCL_VJ44 |
Resource Identification Initiative |
To cite this cell line use: ORL-196 (RRID:CVCL_VJ44) |
Comments |
Population: Indian. Omics: Transcriptomics; RNAseq. Derived from site: In situ; Oral cavity, buccal mucosa; UBERON=UBERON_0006956. |
Sequence variations |
- Mutation; HGNC; HGNC:1787; CDKN2A; Simple; p.Arg80Ter (c.238C>T) (p.Pro94Leu, c.281C>T); ClinVar=VCV000009409; Zygosity=Homozygous (PubMed=27050151).
- Mutation; HGNC; HGNC:3595; FAT1; Simple; p.Leu398Phefs*6 (c.1193dup); Zygosity=Unspecified (PubMed=27050151).
- Mutation; HGNC; HGNC:11998; TP53; Simple; p.Lys321Asnfs*24 (c.960delG); Zygosity=Unspecified (PubMed=24224046; PubMed=27050151).
|
Disease |
Buccal mucosa squamous cell carcinoma (NCIt: C4040) Squamous cell carcinoma of the oral cavity (ORDO: Orphanet_502363) |
Species of origin |
Homo sapiens (Human)
(NCBI Taxonomy: 9606) |
Sex of cell |
Female |
Age at sampling |
59Y |
Category |
Cancer cell line |
STR profile |
Source(s): PubMed=27050151
Markers:Amelogenin | X |
CSF1PO | 10,12 |
D2S1338 | 22,23 |
D3S1358 | 14,17 |
D5S818 | 13,14 |
D7S820 | 8 |
D8S1179 | 13,15 |
D13S317 | 12 |
D16S539 | 12,13 |
D18S51 | 15 |
D19S433 | 14.2,16 |
D21S11 | 29,32.2 |
FGA | 21,22 |
TH01 | 6,7 |
TPOX | 8,11 |
vWA | 14,16 |
Run an STR similarity search on this cell line |
Publications | PubMed=24224046; DOI=10.1371/journal.pone.0080229; PMCID=PMC3817115 Sharifah Nurain Syed Zanaruddin, Pei-San Yee, Seen Yii Hor, Yink Heay Kong, Wan Maria Nabillah Wan Abd Ghani, Wan Mahadzir Wan Mustafa, Rosnah Binti Zain, Stephen S. Prime, Zainal Ariff Abdul Rahman, Sok-Ching Cheong; Common oncogenic mutations are infrequent in oral squamous cell carcinoma of Asian origin. PLoS ONE 8:e80229.1-e80229.12(2013) PubMed=27050151; DOI=10.18632/oncotarget.8533; PMCID=PMC5053689 Muhammad Zaki Hidayatullah Fadlullah, Ivy Kim-Ni Chiang, Kalen R. Dionne, Pei-San Yee, Chai Phei Gan, Kin Kit Sam, Kai Hung Tiong, Adrian Kwok Wen Ng, Daniel Martin, Kue Peng Lim, Thomas George Kallarakkal ...Show all 21 authors... , Wan Mahadzir Wan Mustafa, Shin Hin Lau, Mannil Thomas Abraham, Rosnah Binti Zain, Zainal Ariff Abdul Rahman, Alfredo Alberto Molinolo, Vyomesh Patel, J. Silvio Gutkind, Aik-Choon Tan, Sok-Ching Cheong; Show fewer authors Genetically-defined novel oral squamous cell carcinoma cell lines for the development of molecular therapies. Oncotarget 7:27802-27818(2016) |
Cross-references |
Cell line databases/resources |
cancercelllines; CVCL_VJ44
|
Encyclopedic resources |
Wikidata; Q98128364
|
Polymorphism and mutation databases |
Cosmic; 2531646
Cosmic; 2559744
|
Entry history |
Entry creation | 07-Sep-2018 |
Last entry update | 10-Apr-2025 |
Version number | 10 |
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