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Cellosaurus AG18359 (CVCL_V986)

[Text version]
Cell line name AG18359
Synonyms Min18359; Min 18359
Accession CVCL_V986
Resource Identification Initiative To cite this cell line use: AG18359 (RRID:CVCL_V986)
Comments Group: Non-human primate cell line.
Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV).
Omics: Genomics; ChIP-seq; CTCF.
Omics: Genomics; ChIP-seq; H3K27ac.
Omics: Genomics; ChIP-seq; H3K27me3.
Omics: Genomics; ChIP-seq; H3K4me1.
Omics: Genomics; ChIP-seq; H3K4me3.
Omics: Genomics; ChIP-seq; YY1.
Omics: Proteomics.
Omics: Transcriptomics; RNAseq.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
Species of origin Pan troglodytes (Chimpanzee) (NCBI Taxonomy: 9598)
Sex of cell Female
Age at sampling 29Y
Category Transformed cell line
Publications

PubMed=22720000; DOI=10.1371/journal.pone.0038958; PMCID=PMC3375281
Michael Marotta, Helen Piontkivska, Hisashi Tanaka;
Molecular trajectories leading to the alternative fates of duplicate genes.
PLoS ONE 7:e38958.1-e38958.11(2012)

PubMed=22797897; DOI=10.1073/pnas.1205199109; PMCID=PMC3411951
Rebecca C. Iskow, Omer Gokcumen, Alexej Abyzov, Joanna Malukiewicz, Qi-Hui Zhu, Ann T. Sukumar, Athma A. Pai, Ryan E. Mills, Lukas Habegger, Darren A. Cusanovich, Meagan A. Rubel ...Show all 16 authors... , George H. Perry, Mark Bender Gerstein, Anne C. Stone, Yoav Gilad, Charles Lee; Show fewer authors
Regulatory element copy number differences shape primate expression profiles.
Proc. Natl. Acad. Sci. U.S.A. 109:12656-12661(2012)

PubMed=24136357; DOI=10.1126/science.1242379; PMCID=PMC3994702
Zia Khan, Michael J. Ford, Darren A. Cusanovich, Amy Mitrano, Jonathan Karl Pritchard, Yoav Gilad;
Primate transcript and protein expression levels evolve under compensatory selection pressures.
Science 342:1100-1104(2013)

PubMed=24380390; DOI=10.1186/gb-2013-14-12-r148; PMCID=PMC4056453
Petra Catalina Schwalie, Michelle C. Ward, Carolyn E. Cain, Andre J. Faure, Yoav Gilad, Duncan T. Odom, Paul Flicek;
Co-binding by YY1 identifies the transcriptionally active, highly conserved set of CTCF-bound regions in primate genomes.
Genome Biol. 14:R148.1-R148.15(2013)

PubMed=25468404; DOI=10.1186/s13059-014-0547-3; PMCID=PMC4290387
Xiang Zhou, Carolyn E. Cain, Marsha Myrthil, Noah Lewellen, Katelyn Michelini, Emily R. Davenport, Matthew Stephens, Jonathan Karl Pritchard, Yoav Gilad;
Epigenetic modifications are associated with inter-species gene expression variation in primates.
Genome Biol. 15:547.1-547.19(2014)

Cross-references
Cell line collections (Providers) Coriell; AG18359 - Discontinued
Encyclopedic resources Wikidata; Q54746775
Gene expression databases ArrayExpress; E-MTAB-1511
GEO; GSM945678
GEO; GSM1204869
GEO; GSM1468859
GEO; GSM1468867
GEO; GSM1468875
GEO; GSM1468883
GEO; GSM1468891
GEO; GSM1468899
Proteomic databases PRIDE; PXD000419
Entry history
Entry creation16-Apr-2014
Last entry update10-Apr-2025
Version number13