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Cellosaurus HCC1482 (CVCL_V591)

[Text version]
Cell line name HCC1482
Synonyms Hamon Cancer Center 1482
Accession CVCL_V591
Resource Identification Initiative To cite this cell line use: HCC1482 (RRID:CVCL_V591)
Comments Omics: SNP array analysis.
Omics: Transcriptome analysis by RNAseq.
HLA typing Source: PubMed=26589293
Class I
HLA-AA*33:03,68:01
HLA-BB*35:03,58:01
HLA-CC*03:02,04:01
Class II
HLA-DQDQB1*06:04,06:04
HLA-DRDRB1*11:86,11:86
Disease Cervical adenocarcinoma (NCIt: C4029)
Adenocarcinoma of the cervix uteri (ORDO: Orphanet_213772)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Female
Age at sampling 62Y
Category Cancer cell line
STR profile Source(s): PubMed=25877200

Markers:
AmelogeninX
CSF1PO11
D2S133816,18
D3S135812,16
D5S81811
D7S82010.3,12
D8S117913
D13S31710,12
D16S53911,13,14
D18S5111,12,13
D19S43314,16
D21S1129,33.2
FGA18,23
Penta D12,13
Penta E10,16
TH016,9.3
TPOX8,11
vWA17,20

Run an STR similarity search on this cell line
Web pages http://www.utsouthwestern.edu/edumedia/edufiles/about_us/admin_offices/technology_development/available_technologies/cell-lines.pdf
Publications

PubMed=25485619; DOI=10.1038/nbt.3080
Klijn C., Durinck S., Stawiski E.W., Haverty P.M., Jiang Z.-S., Liu H.-B., Degenhardt J., Mayba O., Gnad F., Liu J.-F., Pau G., Reeder J., Cao Y., Mukhyala K., Selvaraj S.K., Yu M.-M., Zynda G.J., Brauer M.J., Wu T.D., Gentleman R.C., Manning G., Yauch R.L., Bourgon R., Stokoe D., Modrusan Z., Neve R.M., de Sauvage F.J., Settleman J., Seshagiri S., Zhang Z.-M.
A comprehensive transcriptional portrait of human cancer cell lines.
Nat. Biotechnol. 33:306-312(2015)

PubMed=25877200; DOI=10.1038/nature14397
Yu M., Selvaraj S.K., Liang-Chu M.M.Y., Aghajani S., Busse M., Yuan J., Lee G., Peale F.V., Klijn C., Bourgon R., Kaminker J.S., Neve R.M.
A resource for cell line authentication, annotation and quality control.
Nature 520:307-311(2015)

PubMed=26589293; DOI=10.1186/s13073-015-0240-5
Scholtalbers J., Boegel S., Bukur T., Byl M., Goerges S., Sorn P., Loewer M., Sahin U., Castle J.C.
TCLP: an online cancer cell line catalogue integrating HLA type, predicted neo-epitopes, virus and gene expression.
Genome Med. 7:118.1-118.7(2015)

Cross-references
Biological sample resources BioSample; SAMN03473030
Chemistry resources PharmacoDB; HCC1482_476_2019
Encyclopedic resources Wikidata; Q54881575
Experimental variables resources EFO; EFO_0006426
Gene expression databases ArrayExpress; E-MTAB-2706
Sequence databases EGA; EGAS00001000610
Entry history
Entry creation16-Apr-2014
Last entry update05-Oct-2023
Version number15