Cellosaurus logo
expasy logo

Cellosaurus SNU-2972-1 (CVCL_UD98)

[Text][XML][JSON]
Cell line name SNU-2972-1
Synonyms NMC1
Accession CVCL_UD98
Resource Identification Initiative To cite this cell line use: SNU-2972-1 (RRID:CVCL_UD98)
Comments Part of: Seoul National University (SNU) cell line collection.
Population: Korean.
Omics: Genomics; Whole genome sequencing.
Omics: Transcriptomics; RNAseq.
Derived from site: Metastatic; Pleural effusion; UBERON=UBERON_0000175.
Sequence variations
  • Gene fusion; HGNC; HGNC:13575; BRD4 + HGNC; HGNC:29919; NUTM1; Name(s)=BRD4-NUTM1, BRD4-NUT; Note=BRD4 exon 11 fused to NUTM1 exon 2 (PubMed=28203693).
Disease NUT carcinoma (NCIt: C45716)
NUT midline carcinoma (ORDO: Orphanet_443167)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Male
Age at sampling 34Y
Category Cancer cell line
STR profile Source(s): KCLB=02972-1

Markers:
AmelogeninX,Y
CSF1PO10,12
D3S135816
D5S81812,13
D7S8208,10
D13S3178
FGA21,25
TH017,9
TPOX9,11
vWA14,16

Run an STR similarity search on this cell line
Publications

PubMed=28203693; DOI=10.1093/annonc/mdw686; PMCID=PMC5378225
Jake June-Koo Lee, Sandra Louzada, Yohan An, Sun Young Kim, Seolyong Kim, Jeonghwan Youk, Seongyeol Park, Sun Hoe Koo, Bhumsuk Keam, Yoon Kyung Jeon, Ja-Lok Ku ...Show all 14 authors... , Feng-Tang Yang, Tae Min Kim, Young Seok Ju; Show fewer authors
Complex chromosomal rearrangements by single catastrophic pathogenesis in NUT midline carcinoma.
Ann. Oncol. 28:890-897(2017)

Cross-references
Cell line collections (Providers) KCLB; 02972-1
Encyclopedic resources Wikidata; Q98132789
Sequence databases EGA; EGAD00001003117
Entry history
Entry creation13-Nov-2018
Last entry update10-Apr-2025
Version number10