| Cell line name |
NZM047 |
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| Synonyms |
NZM47 |
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| Accession |
CVCL_S424 |
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| Resource Identification Initiative |
To cite this cell line use: NZM047 (RRID:CVCL_S424) |
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| Comments |
Omics: Genomics; Whole exome sequencing.
Omics: Transcriptomics; RNAseq. |
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| Sequence variations |
- Mutation; HGNC; HGNC:4379; GNA11; Simple; p.Gln209Leu (c.626A>T); ClinVar=VCV000376002; Zygosity=Heterozygous (PubMed=32567790).
- Mutation; HGNC; HGNC:7765; NF1; Simple; p.Asn1112fs (c.3335delA); Zygosity=Unspecified (PubMed=32567790).
- Mutation; HGNC; HGNC:7765; NF1; Simple; p.Gln2582Ter (c.7744C>T); Zygosity=Unspecified (PubMed=32567790).
- Mutation; HGNC; HGNC:11730; TERT; Simple; c.1-146C>T (c.250C>T) (C250T); Zygosity=Unspecified; Note=In promoter (PubMed=32567790).
|
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| HLA typing |
Source: PubMed=32567790
| Class I | | HLA-A | A*03:01,03:01 | | HLA-B | B*35:01,44:02 | | HLA-C | C*04:01,05:01 |
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| Disease |
Melanoma (NCIt: C3224) |
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| Species of origin |
Homo sapiens (Human)
(NCBI Taxonomy: 9606) |
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| Originate from same individual |
CVCL_S426 ! NZM041 |
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| Sex of cell |
Sex unspecified |
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| Age at sampling |
Age unspecified |
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| Category |
Cancer cell line |
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| STR profile |
Source(s): PubMed=32567790
Markers:| Amelogenin | X |
| CSF1PO | 10,11 |
| D2S1338 | 19,20 |
| D3S1358 | 15,16 |
| D5S818 | 12,13 |
| D7S820 | 10 |
| D8S1179 | 13,15 |
| D13S317 | 8,11 |
| D16S539 | 11,12 |
| D18S51 | 12,19 |
| D19S433 | 13,14 |
| D21S11 | 29,30 |
| FGA | 25,26 |
| TH01 | 6,9.3 |
| TPOX | 8,9 |
| vWA | 16 |
Run an STR similarity search on this cell line |
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| Publications | PubMed=32567790; DOI=10.1111/pcmr.12908; PMCID=PMC7818249
Khanh B. Tran, Gregory Gimenez, Peter Tsai, Sharada Kolekar, Euan J. Rodger, Aniruddha Chatterjee, Anower Jabed, Jen-Hsing Shih, Wayne R. Joseph, Elaine S. Marshall, Qian Wang ...Show all 15 authors... , Cristin Gregor Print, Michael R. Eccles, Bruce Charles Baguley, Peter R. Shepherd; Show fewer authors
Genomic and signalling pathway characterization of the NZM panel of melanoma cell lines: a valuable model for studying the impact of genetic diversity in melanoma.
Pigment Cell Melanoma Res. 34:136-143(2021) |
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| Cross-references |
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| Cell line databases/resources |
cancercelllines; CVCL_S424
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| Biological sample resources |
BioSample; SAMN14558342
|
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| Encyclopedic resources |
Wikidata; Q54931581
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| Entry history |
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| Entry creation | 05-Nov-2013 |
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| Last entry update | 14-Aug-2025 |
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| Version number | 11 |
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