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Cellosaurus GM12748 (CVCL_R666)

[Text version]
Cell line name GM12748
Accession CVCL_R666
Resource Identification Initiative To cite this cell line use: GM12748 (RRID:CVCL_R666)
Comments Part of: CEPH/Utah pedigree cell line collection.
Part of: International Genome Sample Resource (1000 genomes project) cell lines.
Registration: CEPH Families Reference Panel; 144411.
Population: Caucasian; Utah residents with ancestry from Northern and Western Europe.
Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV).
Omics: Genomics; Whole genome sequencing.
Omics: Transcriptomics; CAGE-seq.
Omics: Transcriptomics; Microarray.
Omics: Variations; CNV analysis.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Male
Age at sampling Age unspecified
Category Transformed cell line
Web pages Info; CEPH; -; https://www.cephb.fr/en/familles_CEPH.php
Publications

PubMed=14583597; DOI=10.1152/physiolgenomics.00163.2003
Tomi Pastinen, Robert Sladek, Scott Gurd, Alya'a Sammak, Bing Ge, Pierre Lepage, Karine Lavergne, Amelie Villeneuve, Tiffany Gaudin, Helena Brandstrom, Allon Beck ...Show all 20 authors... , Andrei Verner, Jade Kingsley, Eef Harmsen, Damian Labuda, Kenneth Morgan, Marie-Claude Vohl, Anna K. Naumova, Daniel Sinnett, Thomas James Hudson; Show fewer authors
A survey of genetic and epigenetic variation affecting human gene expression.
Physiol. Genomics 16:184-193(2004)

PubMed=19797678; DOI=10.1101/gr.097600.109; PMCID=PMC2775589
Renuka R. Nayak, Michael Justin Kearns, Richard Saul Spielman, Vivian G. Cheung;
Coexpression network based on natural variation in human gene expression reveals gene interactions and functions.
Genome Res. 19:1953-1962(2009)

PubMed=20856902; DOI=10.1371/journal.pbio.1000480; PMCID=PMC2939022
Vivian G. Cheung, Renuka R. Nayak, Isabel Xiao-Rong Wang, Susannah Elwyn, Sarah M. Cousins, Michael Morley, Richard Saul Spielman;
Polymorphic cis- and trans-regulation of human gene expression.
PLoS Biol. 8:e1000480.1-e1000480.14(2010)

PubMed=21397061; DOI=10.1016/j.ajhg.2011.02.004; PMCID=PMC3059424
Catarina D. Campbell, Nick Sampas, Anya Tsalenko, Peter H. Sudmant, Jeffrey M. Kidd, Maika Malig, Tiffany H. Vu, Laura Vives, Peter Tsang, Laurakay Bruhn, Evan E. Eichler;
Population-genetic properties of differentiated human copy-number polymorphisms.
Am. J. Hum. Genet. 88:317-332(2011)

PubMed=29116076; DOI=10.1038/s41467-017-01467-7; PMCID=PMC5677018
Marco Garieri, Olivier Delaneau, Federico Andrea Santoni, Richard J. Fish, David Mull, Piero Carninci, Emmanouil Theophilos Dermitzakis, Stylianos E. Antonarakis, Alexandre Fort;
The effect of genetic variation on promoter usage and enhancer activity.
Nat. Commun. 8:1358.1-1358.9(2017)

Cross-references
Cell line collections (Providers) Coriell; GM12748
Cell line databases/resources CLO; CLO_0022574
Biological sample resources BioSample; SAMN00801678
IGSR; NA12748
Encyclopedic resources Wikidata; Q54846013
Gene expression databases ArrayExpress; E-MTAB-5835
GEO; GSM25620
GEO; GSM25621
GEO; GSM314976
GEO; GSM314977
GEO; GSM420958
GEO; GSM420959
GEO; GSM648852
GEO; GSM1719810
Entry history
Entry creation05-Nov-2013
Last entry update10-Apr-2025
Version number19