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Cellosaurus GM19114 (CVCL_P509)

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Cell line name GM19114
Synonyms H19114_LCL
Accession CVCL_P509
Resource Identification Initiative To cite this cell line use: GM19114 (RRID:CVCL_P509)
Comments Part of: International Genome Sample Resource (1000 genomes project) cell lines.
Population: African; Yoruba in Ibadan, Nigeria (YRI).
Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV).
Omics: Genomics; DNA methylation analysis.
Omics: Genomics; Whole genome sequencing.
Omics: Transcriptomics; RNAseq.
Omics: Variations; CNV analysis.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Children:
CVCL_HA52 (H19114)
Sex of cell Female
Age at sampling Age unspecified
Category Transformed cell line
Publications

PubMed=20220758; DOI=10.1038/nature08872; PMCID=PMC3089435
Joseph K. Pickrell, John Carlo Marioni, Athma A. Pai, Jacob F. Degner, Barbara Elizabeth Engelhardt, Everlyne Nkadori, Jean-Baptiste Veyrieras, Matthew Stephens, Yoav Gilad, Jonathan Karl Pritchard;
Understanding mechanisms underlying human gene expression variation with RNA sequencing.
Nature 464:768-772(2010)

PubMed=21397061; DOI=10.1016/j.ajhg.2011.02.004; PMCID=PMC3059424
Catarina D. Campbell, Nick Sampas, Anya Tsalenko, Peter H. Sudmant, Jeffrey M. Kidd, Maika Malig, Tiffany H. Vu, Laura Vives, Peter Tsang, Laurakay Bruhn, Evan E. Eichler;
Population-genetic properties of differentiated human copy-number polymorphisms.
Am. J. Hum. Genet. 88:317-332(2011)

PubMed=24037378; DOI=10.1038/nature12531; PMCID=PMC3918453
Tuuli Lappalainen, Michael Sammeth, Marc R. Friedlander, Peter A.C. 't Hoen, Jean Monlong, Manuel A. Rivas, Mar Gonzalez-Porta, Natalja Kurbatova, Thasso Griebel, Pedro G. Ferreira, Matthias Barann ...Show all 57 authors... , Thomas Wieland, Liliana Greger, Maarten van Iterson, Jonas Carlsson Almlof, Paolo Ribeca, Irina Pulyakhina, Daniela Esser, Thomas Giger, Andrew Tikhonov, Marc Sultan, Gabrielle Bertier, Daniel G. MacArthur, Monkol Lek, Esther Lizano, Henk P.J. Buermans, Ismael Padioleau, Thomas Schwarzmayr, Olof Karlberg, Halit Ongen, Helena Kilpinen, Sergi Beltran, Marta Gut, Katja Kahlem, Vyacheslav Amstislavskiy, Oliver Stegle, Matti Pirinen, Stephen B. Montgomery, Peter Donnelly, Mark I. McCarthy, Paul Flicek, Tim-Matthias Strom, Hans Lehrach, Stefan Schreiber, Ralf Sudbrak, Angel Carracedo, Stylianos E. Antonarakis, Robert Hasler, Ann-Christine Syvanen, Gert-Jan B. van Ommen, Alvis Brazma, Thomas Meitinger, Philip Rosenstiel, Roderic Guigo, Ivo G. Gut, Xavier Estivill, Emmanouil Theophilos Dermitzakis; Show fewer authors
Geuvadis Consortium
Transcriptome and genome sequencing uncovers functional variation in humans.
Nature 501:506-511(2013)

PubMed=26102527; DOI=10.7554/eLife.07103; PMCID=PMC4502404
Irene Gallego-Romero, Bryan J. Pavlovic, Irene Hernando-Herraez, Xiang Zhou, Michelle C. Ward, Nicholas E. Banovich, Courtney L. Kagan, Jonathan E. Burnett, Constance H. Huang, Amy Mitrano, Claudia I. Chavarria ...Show all 20 authors... , Inbar Friedrich Ben-Nun, Ying-Chun Li, Karen Sabatini, Trevor R. Leonardo, Mana M. Parast, Tomas Marques-Bonet, Louise C. Laurent, Jeanne Frances Loring, Yoav Gilad; Show fewer authors
A panel of induced pluripotent stem cells from chimpanzees: a resource for comparative functional genomics.
eLife 4:e07103.1-e07103.29(2015)

PubMed=27617755; DOI=10.1038/srep32406; PMCID=PMC5019111
Pedro G. Ferreira, Martin Oti, Matthias Barann, Thomas Wieland, Suzana Ezquina, Marc R. Friedlander, Manuel A. Rivas, Anna Esteve-Codina, Philip Rosenstiel, Tim-Matthias Strom, Tuuli Lappalainen ...Show all 13 authors... , Roderic Guigo, Michael Sammeth; Show fewer authors
Geuvadis Consortium
Sequence variation between 462 human individuals fine-tunes functional sites of RNA processing.
Sci. Rep. 6:32406-32406(2016)

Cross-references
Cell line collections (Providers) Coriell; GM19114
Cell line databases/resources CLO; CLO_0025681
Biological sample resources IGSR; NA19114
Encyclopedic resources Wikidata; Q54850167
Gene expression databases ArrayExpress; E-GEUV-1
ArrayExpress; E-GEUV-2
ArrayExpress; E-GEUV-3
GEO; GSM485427
GEO; GSM485465
GEO; GSM649309
GEO; GSM1495418
GEO; GSM1502720
GEO; GSM1720121
Proteomic databases PRIDE; PXD001406
Entry history
Entry creation05-Nov-2013
Last entry update10-Apr-2025
Version number18