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Cellosaurus GM19101 (CVCL_P503)

[Text version]
Cell line name GM19101
Synonyms H19101_LCL
Accession CVCL_P503
Resource Identification Initiative To cite this cell line use: GM19101 (RRID:CVCL_P503)
Comments Part of: International Genome Sample Resource (1000 genomes project) cell lines.
Population: African; Yoruba in Ibadan, Nigeria (YRI).
Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV).
Omics: Genomics; DNA methylation analysis.
Omics: Genomics; Whole genome sequencing.
Omics: Transcriptomics; Microarray.
Omics: Transcriptomics; RNAseq.
Omics: Variations; CNV analysis.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Children:
CVCL_HA51 (H19101)
Sex of cell Male
Age at sampling Age unspecified
Category Transformed cell line
Publications

PubMed=17122850; DOI=10.1038/nature05329; PMCID=PMC2669898
Richard Redon, Shumpei Ishikawa, Karen R. Fitch, Lars Feuk, George H. Perry, T. Daniel Andrews, Heike Fiegler, Michael H. Shapero, Andrew R. Carson, Wen-Wei Chen, Eun Kyung Cho ...Show all 43 authors... , Stephanie Dallaire, Jennifer L. Freeman, Juan R. Gonzalez, Monica Gratacos, Jing Huang, Dimitrios Kalaitzopoulos, Daisuke Komura, Jeffrey R. MacDonald, Christian R. Marshall, Rui Mei, Lyndal Montgomery, Kunihiro Nishimura, Kohji Okamura, Fan Shen, Martin John Somerville, Joelle Tchinda, Armand Valsesia, Cara Woodwark, Feng-Tang Yang, Jun-Jun Zhang, Tatiana Zerjal, Jane Zhang, Lluis Armengol, Donald F. Conrad, Xavier Estivill, Chris Tyler-Smith, Nigel P. Carter, Hiroyuki Aburatani, Charles Lee, Keith W. Jones, Stephen Wayne Scherer, Matthew Edward Hurles; Show fewer authors
Global variation in copy number in the human genome.
Nature 444:444-454(2006)

PubMed=19043577; DOI=10.1371/journal.pgen.1000287; PMCID=PMC2583954
Edwin Choy, Roman Yelensky, Sasha Bonakdar, Robert M. Plenge, Richa Saxena, Philip Lawrence De Jager, Stanley Y. Shaw, Cara Susan Wolfish, Jacqueline M. Slavik, Chris Cotsapas, Manuel A. Rivas ...Show all 17 authors... , Emmanouil Theophilos Dermitzakis, Ellen Cahir-McFarland, Elliott Dan Kieff, David A. Hafler, Mark Joseph Daly, David Matthew Altshuler; Show fewer authors
Genetic analysis of human traits in vitro: drug response and gene expression in lymphoblastoid cell lines.
PLoS Genet. 4:e1000287.1-e1000287.16(2008)

PubMed=19797678; DOI=10.1101/gr.097600.109; PMCID=PMC2775589
Renuka R. Nayak, Michael Justin Kearns, Richard Saul Spielman, Vivian G. Cheung;
Coexpression network based on natural variation in human gene expression reveals gene interactions and functions.
Genome Res. 19:1953-1962(2009)

PubMed=20220758; DOI=10.1038/nature08872; PMCID=PMC3089435
Joseph K. Pickrell, John Carlo Marioni, Athma A. Pai, Jacob F. Degner, Barbara Elizabeth Engelhardt, Everlyne Nkadori, Jean-Baptiste Veyrieras, Matthew Stephens, Yoav Gilad, Jonathan Karl Pritchard;
Understanding mechanisms underlying human gene expression variation with RNA sequencing.
Nature 464:768-772(2010)

PubMed=21397061; DOI=10.1016/j.ajhg.2011.02.004; PMCID=PMC3059424
Catarina D. Campbell, Nick Sampas, Anya Tsalenko, Peter H. Sudmant, Jeffrey M. Kidd, Maika Malig, Tiffany H. Vu, Laura Vives, Peter Tsang, Laurakay Bruhn, Evan E. Eichler;
Population-genetic properties of differentiated human copy-number polymorphisms.
Am. J. Hum. Genet. 88:317-332(2011)

PubMed=26102527; DOI=10.7554/eLife.07103; PMCID=PMC4502404
Irene Gallego-Romero, Bryan J. Pavlovic, Irene Hernando-Herraez, Xiang Zhou, Michelle C. Ward, Nicholas E. Banovich, Courtney L. Kagan, Jonathan E. Burnett, Constance H. Huang, Amy Mitrano, Claudia I. Chavarria ...Show all 20 authors... , Inbar Friedrich Ben-Nun, Ying-Chun Li, Karen Sabatini, Trevor R. Leonardo, Mana M. Parast, Tomas Marques-Bonet, Louise C. Laurent, Jeanne Frances Loring, Yoav Gilad; Show fewer authors
A panel of induced pluripotent stem cells from chimpanzees: a resource for comparative functional genomics.
eLife 4:e07103.1-e07103.29(2015)

Cross-references
Cell line collections (Providers) Coriell; GM19101
Cell line databases/resources CLO; CLO_0025873
Biological sample resources IGSR; NA19101
Encyclopedic resources Wikidata; Q54850156
Gene expression databases GEO; GSM112708
GEO; GSM113095
GEO; GSM188717
GEO; GSM273481
GEO; GSM291872
GEO; GSM315168
GEO; GSM485447
GEO; GSM485474
GEO; GSM649207
GEO; GSM1495417
GEO; GSM1502719
Proteomic databases PRIDE; PXD001406
Entry history
Entry creation05-Nov-2013
Last entry update10-Apr-2025
Version number18