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Cellosaurus GM07439 (CVCL_N063)

[Text version]
Cell line name GM07439
Synonyms GM17164
Accession CVCL_N063
Resource Identification Initiative To cite this cell line use: GM07439 (RRID:CVCL_N063)
Comments Part of: Genetic Testing Reference Material (GeT-RM) samples.
Part of: Human variation panel.
Population: African American.
Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV).
Omics: Genomics; DNA methylation analysis.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
HLA typing Source: IPD-IMGT/HLA=23057
Class I
HLA-AA*29:02,68:02
HLA-BB*42:02,53:01
HLA-CC*04:CVAF,17:MN
Class II
HLA-DRDRB1*04:03,15:03

Source: PubMed=29959025
Class I
HLA-AA*29:02:01,68:02:01
HLA-BB*42:02:01,53:01:01
HLA-CC*04:01:01,17:01:01
Class II
HLA-DPDPA1*02:02:02,03:01
DPB1*01:01:01,105:01:01
HLA-DQDQA1*01:02:01,03:01:01
DQB1*03:02:01,06:02:01
HLA-DRDRB1*04:03:01,15:03:01
DRB4*01:03:01
DRB5*01:01:01
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Female
Age at sampling Age unspecified
Category Transformed cell line
Publications

CLPUB00447
Richard A. Mulivor, Sharon F. Suchy;
1992/1993 catalog of cell lines. NIGMS human genetic mutant cell repository. 16th edition. October 1992.
(In misc. document) Institute for Medical Research (Camden, N.J.) NIH 92-2011; pp.1-918; National Institutes of Health; Bethesda; USA (1992)

PubMed=16260726; DOI=10.1073/pnas.0508390102; PMCID=PMC1283473
Sandra L. Harris, German Gil, Harlan Robins, Wen-Wei Hu, Kim Marie Hirshfield, Elisabeth Bond, Gareth Bond, Arnold Jay Levine;
Detection of functional single-nucleotide polymorphisms that affect apoptosis.
Proc. Natl. Acad. Sci. U.S.A. 102:16297-16302(2005)

PubMed=20889555; DOI=10.2353/jmoldx.2010.100090; PMCID=PMC2962854
Victoria M. Pratt, Barbara A. Zehnbauer, Jean Amos Wilson, Ruth Epstein-Baak, Nikolina Babic, Maria P. Bettinotti, Arlene M. Buller-Burckle, Kenneth G. Butz, Matthew Campbell, Chris Civalier, Abdalla El-Badry ...Show all 29 authors... , Daniel H. Farkas, Elaine Lyon, Saptarshi Mandal, Jason McKinney, Kasinathan Muralidharan, LeAnne Noll, Tara Sander, Junaid Shabbeer, Ching-Ying Huang Smith, Milhan Telatar, Lorraine H. Toji, Anand Vairavan, Carlos Vance, Karen E. Weck, Alan H.B. Wu, Kiang-Teck J. Yeo, Markus Zeller, Lisa V. Kalman; Show fewer authors
Characterization of 107 genomic DNA reference materials for CYP2D6, CYP2C19, CYP2C9, VKORC1, and UGT1A1: a GeT-RM and Association for Molecular Pathology collaborative project.
J. Mol. Diagn. 12:835-846(2010)

PubMed=26621101; DOI=10.1016/j.jmoldx.2015.08.005; PMCID=PMC4695224
Victoria M. Pratt, Robin E. Everts, Praful Aggarwal, Brittany N. Beyer, Ulrich Broeckel, Ruth Epstein-Baak, Paul Hujsak, Ruth Kornreich, Jun Liao, Rachel Lorier, Stuart A. Scott ...Show all 15 authors... , Ching-Ying Huang Smith, Lorraine H. Toji, Amy Turner, Lisa V. Kalman; Show fewer authors
Characterization of 137 genomic DNA reference materials for 28 pharmacogenetic genes: a GeT-RM collaborative project.
J. Mol. Diagn. 18:109-123(2016)

PubMed=29474986; DOI=10.1016/j.jmoldx.2018.01.011
Victoria M. Pratt, Andria L. Del Tredici, Houda Hachad, Yuan Ji, Lisa V. Kalman, Stuart A. Scott, Karen E. Weck;
Recommendations for clinical CYP2C19 genotyping allele selection: a report of the Association for Molecular Pathology.
J. Mol. Diagn. 20:269-276(2018)

PubMed=29959025; DOI=10.1016/j.jmoldx.2018.05.009; PMCID=PMC6939753
Maria P. Bettinotti, Deborah Ferriola, Jamie L. Duke, Timothy L. Mosbruger, Nikolaos Tairis, Lawrence Jennings, Lisa V. Kalman, Dimitrios S. Monos;
Characterization of 108 genomic DNA reference materials for 11 human leukocyte antigen loci: a GeT-RM collaborative project.
J. Mol. Diagn. 20:703-715(2018)

PubMed=31401124; DOI=10.1016/j.jmoldx.2019.06.007; PMCID=PMC6854474
Andrea Gaedigk, Amy Turner, Robin E. Everts, Stuart A. Scott, Praful Aggarwal, Ulrich Broeckel, Gwendolyn A. McMillin, Roberta Melis, Erin C. Boone, Victoria M. Pratt, Lisa V. Kalman;
Characterization of reference materials for genetic testing of CYP2D6 alleles: a GeT-RM collaborative project.
J. Mol. Diagn. 21:1034-1052(2019)

Cross-references
Cell line collections (Providers) Coriell; GM07439
Coriell; GM17164
Cell line databases/resources CLO; CLO_0013994
CLO; CLO_0016861
IPD-IMGT/HLA; 23057
Encyclopedic resources Wikidata; Q54842757
Gene expression databases GEO; GSM569691
GEO; GSM596229
GEO; GSM597063
GEO; GSM617121
GEO; GSM924674
Entry history
Entry creation05-Nov-2013
Last entry update10-Apr-2025
Version number18