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Cellosaurus AG09309 (CVCL_L242)

[Text version]
Cell line name AG09309
Synonyms AG 9309
Accession CVCL_L242
Resource Identification Initiative To cite this cell line use: AG09309 (RRID:CVCL_L242)
Comments Part of: ENCODE project common cell types; tier 3.
Population: Caucasian.
Omics: Genomics; ChIP-seq; CTCF.
Omics: Genomics; ChIP-seq; H3K4me3.
Omics: Genomics; DNA methylation analysis.
Misspelling: GM 9309; PubMed=8643543.
Derived from site: In situ; Toe, skin; UBERON=UBERON_0003530.
Cell type: Fibroblast of skin; CL=CL_0002620.
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Children:
CVCL_C7PJ (AG28869)
Sex of cell Female
Age at sampling 21Y
Category Finite cell line
Web pages Info; ENCODE; -; http://genome.ucsc.edu/ENCODE/protocols/cell/human/AG09309_Stam_protocol.pdf
Publications

CLPUB00597
National Institute on Aging
1994 catalog of cell lines. NIA Aging Cell Repository.
(In misc. document) Institute for Medical Research (Camden, N.J.); pp.1-351; National Institutes of Health; Bethesda; USA (1994)

PubMed=8643543; DOI=10.1073/pnas.93.10.5146; PMCID=PMC39422
Ram Parshad, Katherine Koontz Sanford, Floyd M. Price, Lynn K. Melnick, Linda E. Nee, Mark B. Schapiro, Robert E. Tarone, Jay H. Robbins;
Fluorescent light-induced chromatid breaks distinguish Alzheimer disease cells from normal cells in tissue culture.
Proc. Natl. Acad. Sci. U.S.A. 93:5146-5150(1996)

Patent=US5773219
Katherine Koontz Sanford, Ram Parshad, Jay H. Robbins;
Process for detecting Alzheimer disease using cultured cells.
Patent number US5773219, 30-Jun-1998

PubMed=12297622; DOI=10.1073/pnas.162488599; PMCID=PMC130553
Howard Yuan-Hao Chang, Jen-Tsan Ashley Chi, Sandrine Dudoit, Chanda Bondre, Matt van de Rijn, David Botstein, Patrick O'Reilly Brown;
Diversity, topographic differentiation, and positional memory in human fibroblasts.
Proc. Natl. Acad. Sci. U.S.A. 99:12877-12882(2002)

PubMed=22720000; DOI=10.1371/journal.pone.0038958; PMCID=PMC3375281
Michael Marotta, Helen Piontkivska, Hisashi Tanaka;
Molecular trajectories leading to the alternative fates of duplicate genes.
PLoS ONE 7:e38958.1-e38958.11(2012)

PubMed=23325432; DOI=10.1101/gr.147942.112; PMCID=PMC3589544
Katherine E. Varley, Jason Gertz, Kevin M. Bowling, Stephanie L. Parker, Timothy E. Reddy, Florencia Pauli-Behn, Marie K. Cross, Brian A. Williams, John A. Stamatoyannopoulos, Gregory E. Crawford, Devin Michael Absher ...Show all 13 authors... , Barbara Jane Wold, Richard M. Myers; Show fewer authors
Dynamic DNA methylation across diverse human cell lines and tissues.
Genome Res. 23:555-567(2013)

Cross-references
Cell line collections (Providers) Coriell; AG09309
Cell line databases/resources CLO; CLO_0021752
Biological sample resources ENCODE; ENCBS005ENC
ENCODE; ENCBS035TPY
ENCODE; ENCBS112TMK
ENCODE; ENCBS394ULN
Encyclopedic resources Wikidata; Q54742869
Gene expression databases GEO; GSM510522
GEO; GSM510525
GEO; GSM749680
GEO; GSM749718
GEO; GSM749750
GEO; GSM945167
GEO; GSM945168
Entry history
Entry creation06-May-2013
Last entry update10-Apr-2025
Version number18