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Cellosaurus AG09309 (CVCL_L242)

[Text version]
Cell line name AG09309
Synonyms AG 9309
Accession CVCL_L242
Resource Identification Initiative To cite this cell line use: AG09309 (RRID:CVCL_L242)
Comments Part of: ENCODE project common cell types; tier 3.
Population: Caucasian.
Omics: CTCF ChIP-seq epigenome analysis.
Omics: H3K4me3 ChIP-seq epigenome analysis.
Omics: DNA methylation analysis.
Misspelling: GM 9309; PubMed=8643543.
Derived from site: In situ; Toe, skin; UBERON=UBERON_0003530.
Cell type: Fibroblast of skin; CL=CL_0002620.
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Children:
CVCL_C7PJ (AG28869)
Sex of cell Female
Age at sampling 21Y
Category Finite cell line
Web pages http://genome.ucsc.edu/ENCODE/protocols/cell/human/AG09309_Stam_protocol.pdf

National Institute on Aging
1994 catalog of cell lines. NIA Aging Cell Repository.
(In) Institute for Medical Research (Camden, N.J.); pp.1-351; National Institutes of Health; Bethesda (1994)

PubMed=8643543; DOI=10.1073/pnas.93.10.5146
Parshad R., Sanford K.K., Price F.M., Melnick L.K., Nee L.E., Schapiro M.B., Tarone R.E., Robbins J.H.
Fluorescent light-induced chromatid breaks distinguish Alzheimer disease cells from normal cells in tissue culture.
Proc. Natl. Acad. Sci. U.S.A. 93:5146-5150(1996)

Sanford K.K., Parshad R., Robbins J.H.
Process for detecting Alzheimer disease using cultured cells.
Patent number US5773219, 30-Jun-1998

PubMed=12297622; DOI=10.1073/pnas.162488599
Chang H.Y.-H., Chi J.-T.A., Dudoit S., Bondre C., van de Rijn M., Botstein D., Brown P.O.
Diversity, topographic differentiation, and positional memory in human fibroblasts.
Proc. Natl. Acad. Sci. U.S.A. 99:12877-12882(2002)

PubMed=22720000; DOI=10.1371/journal.pone.0038958
Marotta M., Piontkivska H., Tanaka H.
Molecular trajectories leading to the alternative fates of duplicate genes.
PLoS ONE 7:E38958-E38958(2012)

PubMed=23325432; DOI=10.1101/gr.147942.112
Varley K.E., Gertz J., Bowling K.M., Parker S.L., Reddy T.E., Pauli-Behn F., Cross M.K., Williams B.A., Stamatoyannopoulos J.A., Crawford G.E., Absher D.M., Wold B.J., Myers R.M.
Dynamic DNA methylation across diverse human cell lines and tissues.
Genome Res. 23:555-567(2013)

Cell line collections (Providers) Coriell; AG09309
Cell line databases/resources CLO; CLO_0021752
Biological sample resources ENCODE; ENCBS005ENC
Encyclopedic resources Wikidata; Q54742869
Gene expression databases GEO; GSM510522
GEO; GSM510525
GEO; GSM749680
GEO; GSM749718
GEO; GSM749750
GEO; GSM945167
GEO; GSM945168
Entry history
Entry creation06-May-2013
Last entry update29-Jun-2023
Version number17