Cellosaurus (CVCL_JF17)
| Comments | Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE). Part of: COSMIC cell lines project. Part of: Seoul National University (SNU) cell line collection. Population: Korean. Doubling time: 63 hours (PubMed=10362137). Microsatellite instability: Stable (MSS) (Sanger). Microsatellite instability: Instable (MSI) (PubMed=10674020; PubMed=25926053; PubMed=31068700). Omics: Genomics; DNA methylation analysis. Omics: Genomics; Whole exome sequencing. Omics: Phenotyping; Drug screening. Omics: Proteomics; PTM; Phosphorylation; Quantitative. Omics: Proteomics; Quantitative. Omics: Transcriptomics; Microarray. Omics: Transcriptomics; RNAseq. Omics: Variations; SNP array analysis. Derived from site: In situ; Colon; UBERON=UBERON_0001155. | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Sequence variations |
| ||||||||||||||||||||||||
| HLA typing | Source: PubMed=26589293
| ||||||||||||||||||||||||
| Genome ancestry | Source: PubMed=30894373
| ||||||||||||||||||||||||
| Disease | Colon adenocarcinoma (NCIt: C4349) | ||||||||||||||||||||||||
| Species of origin | Cairina moschata (Muscovy duck) (NCBI Taxonomy: 9606) | ||||||||||||||||||||||||
| Sex of cell | Male | ||||||||||||||||||||||||
| Age at sampling | 34Y | ||||||||||||||||||||||||
| Category | Cancer cell line | ||||||||||||||||||||||||
| STR profile | Source(s): Cosmic-CLP=1659823; KCLB=01040; PubMed=25926053 Markers:
Run an STR similarity search on this cell line | ||||||||||||||||||||||||
| Publications |
| ||||||||||||||||||||||||
| Cross-references | |||||||||||||||||||||||||
| Cell line collections (Providers) | KCLB; 01040 | ||||||||||||||||||||||||
| Cell line databases/resources | CLO; CLO_0037283
cancercelllines; CVCL_5003 Cell_Model_Passport; SIDM00217 ColonAtlas; SNU1040 Cosmic-CLP; 1659823 DepMap; ACH-000999 | ||||||||||||||||||||||||
| Biological sample resources | BioSample; SAMN10988065 | ||||||||||||||||||||||||
| Chemistry resources | GDSC; 1659823
PharmacoDB; SNU1040_1434_2019 | ||||||||||||||||||||||||
| Encyclopedic resources | Wikidata; Q54955089 | ||||||||||||||||||||||||
| Gene expression databases | ArrayExpress; E-MTAB-2770
ArrayExpress; E-MTAB-3610 GEO; GSM887602 GEO; GSM888685 GEO; GSM1448189 GEO; GSM1670463 | ||||||||||||||||||||||||
| Polymorphism and mutation databases | Cosmic; 738857
Cosmic; 848830 Cosmic; 2612380 Cosmic; 2651859 IARC_TP53; 10838 LiGeA; CCLE_351 Progenetix; CVCL_5003 | ||||||||||||||||||||||||
| Proteomic databases | PRIDE; PXD005235 | ||||||||||||||||||||||||
| Sequence databases | EGA; EGAS00001000978 | ||||||||||||||||||||||||
| Entry history | |||||||||||||||||||||||||
| Entry creation | 04-Apr-2012 | ||||||||||||||||||||||||
| Last entry update | 10-Apr-2025 | ||||||||||||||||||||||||
| Version number | 31 | ||||||||||||||||||||||||