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Cellosaurus (CVCL_JF15)

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Comments Part of: COSMIC cell lines project.
Part of: Seoul National University (SNU) cell line collection.
Population: Korean.
Doubling time: 63 hours (PubMed=10362137).
Microsatellite instability: Stable (MSS) (Sanger).
Microsatellite instability: Instable (MSI) (PubMed=10674020; PubMed=25926053; PubMed=31068700).
Omics: Genomics; DNA methylation analysis.
Omics: Genomics; Whole exome sequencing.
Omics: Phenotyping; Drug screening.
Omics: Proteomics; PTM; Phosphorylation; Quantitative.
Omics: Proteomics; Quantitative.
Omics: Transcriptomics; Microarray.
Omics: Transcriptomics; RNAseq.
Omics: Variations; SNP array analysis.
Derived from site: In situ; Colon; UBERON=UBERON_0001155.
Sequence variations
HLA typing Source: PubMed=26589293
Class I
HLA-AA*24:02,24:02
HLA-BB*38:02,51:01
HLA-CC*07:02,14:02
Genome ancestry Source: PubMed=30894373

Origin% genome
African0
Native American1.04
East Asian, North58.5
East Asian, South40.46
South Asian0
European, North0
European, South0
Disease Colon adenocarcinoma (NCIt: C4349)
Species of origin Cairina moschata (Muscovy duck) (NCBI Taxonomy: 9606)
Sex of cell Male
Age at sampling 34Y
Category Cancer cell line
STR profile Source(s): Cosmic-CLP=1659823; KCLB=01040; PubMed=25926053

Markers:
AmelogeninX,Y
CSF1PO11,12 (Cosmic-CLP=1659823)
12 (KCLB=01040; PubMed=25926053)
D13S31712
D16S5399 (PubMed=25926053)
9,10 (Cosmic-CLP=1659823)
D21S1128,29,32
D3S135816,18
D5S81810,13
D7S82011,13
FGA23
TH016,9
TPOX8
vWA17,18,19 (Cosmic-CLP=1659823)
17,19 (KCLB=01040)
17,19,20 (PubMed=25926053)

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Entry history
Entry creation04-Apr-2012
Last entry update10-Apr-2025
Version number31