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Cellosaurus Mm 173-02 (CVCL_IZ87)

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Cell line name Mm 173-02
Synonyms Mm173-2002; 173-2002
Accession CVCL_IZ87
Resource Identification Initiative To cite this cell line use: Mm 173-02 (RRID:CVCL_IZ87)
Comments Group: Non-human primate cell line.
From: New England Primate Research Center (NEPRC), Harvard Medical School; Boston; USA.
Transformant: NCBI_TaxID; 106332; Papiine herpesvirus 1 (Herpesvirus papio).
Omics: Genomics; ChIP-seq; CTCF.
Omics: Genomics; ChIP-seq; H3K27ac.
Omics: Genomics; ChIP-seq; H3K27me3.
Omics: Genomics; ChIP-seq; H3K4me1.
Omics: Genomics; ChIP-seq; H3K4me3.
Omics: Genomics; ChIP-seq; YY1.
Omics: Transcriptomics; RNAseq.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
Species of origin Macaca mulatta (Rhesus macaque) (NCBI Taxonomy: 9544)
Sex of cell Female
Age at sampling Age unspecified
Category Transformed cell line
Publications

PubMed=22797897; DOI=10.1073/pnas.1205199109; PMCID=PMC3411951
Rebecca C. Iskow, Omer Gokcumen, Alexej Abyzov, Joanna Malukiewicz, Qi-Hui Zhu, Ann Tabitha Sukumar, Athma A. Pai, Ryan E. Mills, Lukas Habegger, Darren A. Cusanovich, Meagan A. Rubel ...Show all 16 authors... , George H. Perry, Mark Bender Gerstein, Anne C. Stone, Yoav Gilad, Charles Lee; Show fewer authors
Regulatory element copy number differences shape primate expression profiles.
Proc. Natl. Acad. Sci. U.S.A. 109:12656-12661(2012)

PubMed=24380390; DOI=10.1186/gb-2013-14-12-r148; PMCID=PMC4056453
Petra Catalina Schwalie, Michelle Claire Ward, Carolyn E. Cain, Andre J. Faure, Yoav Gilad, Duncan T. Odom, Paul Flicek;
Co-binding by YY1 identifies the transcriptionally active, highly conserved set of CTCF-bound regions in primate genomes.
Genome Biol. 14:R148.1-R148.15(2013)

PubMed=25468404; DOI=10.1186/s13059-014-0547-3; PMCID=PMC4290387
Xiang Zhou, Carolyn E. Cain, Marsha Myrthil, Noah Lewellen, Katelyn Michelini, Emily R. Davenport, Matthew Stephens, Jonathan Karl Pritchard, Yoav Gilad;
Epigenetic modifications are associated with inter-species gene expression variation in primates.
Genome Biol. 15:547.1-547.19(2014)

Cross-references
Encyclopedic resources Wikidata; Q54905988
Gene expression databases ArrayExpress; E-MTAB-1511
GEO; GSM945685
GEO; GSM1468908
GEO; GSM1468916
GEO; GSM1468924
GEO; GSM1468931
GEO; GSM1468939
GEO; GSM1468947
Entry history
Entry creation15-May-2017
Last entry update14-Aug-2025
Version number10