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Cellosaurus CS83iCTR33-n1 (CVCL_IW28)

[Text version]
Cell line name CS83iCTR33-n1
Synonyms CS83iCTR-33n1; CS83iCTR33n1; 83iCTR; 83i
Accession CVCL_IW28
Resource Identification Initiative To cite this cell line use: CS83iCTR33-n1 (RRID:CVCL_IW28)
Comments From: Cedars-Sinai Medical Center iPSC Core Facility; Los Angeles; USA.
Population: Caucasian.
Omics: Genomics; Chromatin accessibility; ATAC-seq.
Omics: Transcriptomics; RNAseq.
Omics: Variations; Array-based CGH.
Donor information: At sampling donor was not affected with Huntington disease but at significant risk for disease.
Derived from site: In situ; Skin; UBERON=UBERON_0002097.
Cell type: Fibroblast of skin; CL=CL_0002620.
Sequence variations
  • Mutation; HGNC; HGNC:4851; HTT; Repeat_expansion; p.Gln18[33] (c.52CAG(33)) (c.52CAG[(27_35)]); ClinVar=VCV000031915; Zygosity=Heterozygous (from parent cell line).
Disease Huntington's disease (NCIt: C82342)
Huntington disease (ORDO: Orphanet_399)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Parent: CVCL_W557 (GM02183)
Sex of cell Female
Age at sampling 21Y
Category Induced pluripotent stem cell
STR profile Source(s): PubMed=34746695

Markers:
AmelogeninX
CSF1PO12
D5S81811,12
D7S8208,12
D13S31714
D16S53911
TH019,9.3
TPOX8
vWA16,19

Run an STR similarity search on this cell line
Publications

PubMed=25740845; DOI=10.1093/hmg/ddv080; PMCID=PMC4424959
Virginia B. Mattis, Colton Tom, Sergey Akimov, Jasmine Saeedian, Michael E. Ostergaard, Amber L. Southwell, Crystal N. Doty, Loren Ornelas, Anais Sahabian, Lindsay Lenaeus, Berhan Mandefro ...Show all 16 authors... , Dhruv Sareen, Jamshid Arjomand, Michael Reuben Hayden, Christopher A. Ross, Clive N. Svendsen; Show fewer authors
HD iPSC-derived neural progenitors accumulate in culture and are susceptible to BDNF withdrawal due to glutamate toxicity.
Hum. Mol. Genet. 24:3257-3271(2015)

PubMed=26185257; DOI=10.5966/sctm.2015-0050; PMCID=PMC4542875
Seigo Hatada, Aparna Subramanian, Berhan Mandefro, Song-Yang Ren, Ho Won Kim, Jie Tang, Vincent Funari, Robert H. Baloh, Dhruv Sareen, Vaithilingaraja Arumugaswami, Clive N. Svendsen;
Low-dose irradiation enhances gene targeting in human pluripotent stem cells.
Stem Cells Transl. Med. 4:998-1010(2015)

PubMed=34746695; DOI=10.1016/j.isci.2021.103221; PMCID=PMC8554488
Johnathan Li, Ryan G. Lim, Julia A. Kaye, Victoria J. Dardov, Alyssa Nicole Coyne, Jie Wu, Pamela Milani, Andrew Cheng, Terri G. Thompson, Loren Ornelas, Aaron Frank ...Show all 46 authors... , Miriam Adam, Maria Gabriela Banuelos, Malcolm Casale, Veerle Cox, Renan Antonio Escalante-Chong, J. Gavin Daigle, Emilda Gomez, Lindsey Hayes, Ronald J. Holewenski, Susan Lei, Alexander LeNail, Leandro Lima, Berhan Mandefro, Andrea Matlock, Lindsay Panther, Natasha Leanna Patel-Murray, Jacqueline T. Pham, Divya Ramamoorthy, Karen Sachs, Brandon Shelley, Jennifer Stocksdale, Hannah Trost, Mark Wilhelm, Vidya Venkatraman, Brook T. Wassie, Stacia K. Wyman, Stephanie Yang, Jennifer Eileen Van Eyk, Thomas Eugene Lloyd, Steven Finkbeiner, Ernest Fraenkel, Jeffrey D. Rothstein, Dhruv Sareen, Clive N. Svendsen, Leslie M. Thompson; Show fewer authors
NeuroLINCS Consortium
NYGC ALS Consortium
An integrated multi-omic analysis of iPSC-derived motor neurons from C9ORF72 ALS patients.
iScience 24:103221.1-103221.33(2021)

PubMed=35805069; DOI=10.3390/cells11131984; PMCID=PMC9265327
Francisco Jose Molina-Ruiz, Clelia Introna, Georgina Bombau, Mireia Galofre, Josep Maria Canals;
Standardization of cell culture conditions and routine genomic screening under a quality management system leads to reduced genomic instability in hPSCs.
Cells 11:1984.1-1984.25(2022)

Cross-references
Cell line databases/resources CLO; CLO_0037501
LINCS_LDP; LSC-1003
Encyclopedic resources Wikidata; Q54814555
Entry history
Entry creation03-Mar-2017
Last entry update10-Apr-2025
Version number19