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Cellosaurus XP4PA-SV-EB (CVCL_F625)

[Text version]
Cell line name XP4PA-SV-EB
Synonyms GM15983
Accession CVCL_F625
Resource Identification Initiative To cite this cell line use: XP4PA-SV-EB (RRID:CVCL_F625)
Comments Genetic integration: Method=Transfection/transduction; Gene=UniProtKB; P03211; Epstein-Barr virus (strain B95-8) EBNA1.
Transformant: NCBI_TaxID; 1891767; Simian virus 40 (SV40) (Note=pLASwt).
Derived from site: In situ; Amniotic fluid; UBERON=UBERON_0000173.
Sequence variations
  • Mutation; HGNC; HGNC:12816; XPC; Simple; p.Val548Alafs*25 (c.1639_1640TG[2]) (c.1643_1644delTG) (1744_1745delTG); ClinVar=VCV000000262; Zygosity=Heterozygous (from parent cell line).
Disease Xeroderma pigmentosum, complementation group C (NCIt: C114770)
Xeroderma pigmentosum (ORDO: Orphanet_910)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Parent: CVCL_6E33 (XP4PA(SV))
Children:
CVCL_F627 (XP4PA-SE1)CVCL_F628 (XP4PA-SE2)
Sex of cell Male
Age at sampling Fetus
Category Transformed cell line
Publications

PubMed=1660831; DOI=10.1016/0378-1119(91)90328-9
Carolyn A. Peterson, Randy J. Legerski;
High-frequency transformation of human repair-deficient cell lines by an Epstein-Barr virus-based cDNA expression vector.
Gene 107:279-284(1991)

PubMed=10681431; DOI=10.1073/pnas.040559697; PMCID=PMC15769
Steffen Emmert, Nobuhiko Kobayashi, Sikandar G. Khan, Kenneth H. Kraemer;
The xeroderma pigmentosum group C gene leads to selective repair of cyclobutane pyrimidine dimers rather than 6-4 photoproducts.
Proc. Natl. Acad. Sci. U.S.A. 97:2151-2156(2000)

PubMed=14662655; DOI=10.1093/hmg/ddh026
Sikandar G. Khan, Ahmet Metin, Engin Mevlut Gozukara, Hiroki Inui, Tala Shahlavi, Vanessa Muniz-Medina, Carl C. Baker, Takahiro Ueda, Juliet R. Aiken, Thomas D. Schneider, Kenneth H. Kraemer;
Two essential splice lariat branchpoint sequences in one intron in a xeroderma pigmentosum DNA repair gene: mutations result in reduced XPC mRNA levels that correlate with cancer risk.
Hum. Mol. Genet. 13:343-352(2004)

PubMed=18955168; DOI=10.1016/j.dnarep.2008.09.007; PMCID=PMC2684809
Sikandar G. Khan, Kyu-Seon Oh, Steffen Emmert, Kyoko Imoto, Deborah Tamura, John Joseph DiGiovanna, Tala Shahlavi, Najealicka Armstrong, Carl C. Baker, Marcy Neuburg, Christopher Zalewski ...Show all 15 authors... , Carmen C. Brewer, Edythe Wiggs, Raphael Schiffmann, Kenneth H. Kraemer; Show fewer authors
XPC initiation codon mutation in xeroderma pigmentosum patients with and without neurological symptoms.
DNA Repair 8:114-125(2009)

Cross-references
Cell line collections (Providers) Coriell; GM15983
Cell line databases/resources CLO; CLO_0018741
Encyclopedic resources Wikidata; Q54994956
Entry history
Entry creation11-Feb-2013
Last entry update19-Dec-2024
Version number16