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Cellosaurus GM23338 (CVCL_F182)

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Cell line name GM23338
Synonyms GM23338*B; PGP1 iPSC; PGP1-iPS; PGP1 hiPSC; PGP1-1; PGP1; HVRDi004-B; UMi031-A
Accession CVCL_F182
Secondary accession CVCL_A0ZT
Resource Identification Initiative To cite this cell line use: GM23338 (RRID:CVCL_F182)
Comments Part of: Personal Genome Project (PGP) cell line collection.
Population: Caucasian.
Omics: Genomics; Whole genome sequencing.
Omics: Transcriptomics; Microarray.
Omics: Transcriptomics; RNAseq.
Derived from site: In situ; Arm, skin; UBERON=UBERON_0002427.
Cell type: Fibroblast of skin; CL=CL_0002620.
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Parent: CVCL_F183 (GM23248)
Children:
CVCL_E3XV (UAB-iPSC-IFT88 KO#1)CVCL_E3XM (UAB-iPSC-PKD1 KO#1)CVCL_E3XN (UAB-iPSC-PKD1 KO het #2)
CVCL_E3XP (UAB-iPSC-PKD2 KO#1)CVCL_E3XS (UAB-iPSC-PKD2 KO#2)CVCL_E3XU (UAB-iPSC-PKD2 L656W/null)
CVCL_E3XX (UAB-iPSC-PKD2-cKO NP/null #1)CVCL_E3XY (UAB-iPSC-PKD2-cKO P/null #1)CVCL_E3XT (UAB-iPSC-PKD2-Halo#1)
CVCL_E3XQ (UAB-iPSC-PKHD1 KO#1)CVCL_A0ZU (UMi031-A-2)
Sex of cell Male
Age at sampling 55Y
Category Induced pluripotent stem cell
Web pages Info; PGP; hu43860C; https://my.pgp-hms.org/profile_public?hex=hu43860C
Publications

PubMed=19911041; DOI=10.1371/journal.pgen.1000718; PMCID=PMC2766639
Je-Hyuk Lee, In-Hyun Park, Yuan Gao, Jin Billy Li, Zhe Li, George Quentin Daley, Kun Zhang, George McDonald Church;
A robust approach to identifying tissue-specific gene expression regulatory variants using personalized human induced pluripotent stem cells.
PLoS Genet. 5:e1000718.1-e1000718.15(2009)

PubMed=26004630; DOI=10.1016/j.stemcr.2015.04.009; PMCID=PMC4471828
Yoshiaki Tanaka, Eriona Hysolli, Juan Su, Yang-Fei Xiang, Kun-Yong Kim, Mei Zhong, Yu-Mei Li, Kartoosh Heydari, Ghia Euskirchen, Michael P. Snyder, Xing-Hua Pan ...Show all 13 authors... , Sherman Morton Weissman, In-Hyun Park; Show fewer authors
Transcriptome signature and regulation in human somatic cell reprogramming.
Stem Cell Reports 4:1125-1139(2015)

PubMed=34352618; DOI=10.1016/j.scr.2021.102474
Aida Nourbakhsh, Nicholas C. Gosstola, Cristina Fernandez-Valle, Derek M. Dykxhoorn, Xue-Zhong Liu;
Characterization of UMi031-A-2 inducible pluripotent stem cell line with a neurofibromatosis type 2-associated mutation.
Stem Cell Res. 55:102474-102474(2021)

PubMed=36459969; DOI=10.1016/j.stem.2022.11.004; PMCID=PMC9782786
Caroline B. Pantazis, Andrian Yang, Erika Lara, Justin A. McDonough, Cornelis Blauwendraat, Li-Rong Peng, Hideyuki Oguro, Jitendra Kanaujiya, Ji-Zhong Zou, David Sebesta, Gretchen Pratt ...Show all 95 authors... , Erin Cross, Jeffrey Blockwick, Philip Buxton, Lauren Brooke Kinner-Bibeau, Constance Medura, Christopher Tompkins, Stephen Hughes, Marianita Santiana, Faraz Faghri, Mike A. Nalls, Daniel Vitale, Shannon Ballard, Yue A. Qi, Daniel M. Ramos, Kailyn M. Anderson, Julia Stadler, Priyanka Narayan, Jason Papademetriou, Luke Reilly, Matthew P. Nelson, Sanya Aggarwal, Leah U. Rosen, Peter Kirwan, Venkat Pisupati, Steven L. Coon, Sonja W. Scholz, Theresa Priebe, Miriam Ottl, Jian Dong, Marieke Meijer, Lara J.M. Janssen, Vanessa S. Lourenco, Rik van der Kant, Dennis Crusius, Dominik Paquet, Ana-Caroline Raulin, Guo-Jun Bu, Aaron Held, Brian Jason Wainger, Rebecca M.C. Gabriele, Jackie M. Casey, Selina Wray, Kwaku Dad Abu-Bonsrah, Clare L. Parish, Melinda S. Beccari, Don Whitefield Cleveland, Emmy Li, Indigo V.L. Rose, Martin Kampmann, Carles Calatayud Aristoy, Patrik Verstreken, Laurin Heinrich, Max Yang Chen, Birgitt Schule, Dan Dou, Erika L.F. Holzbaur, Maria Clara Zanellati, Richa Basundra, Mohanish Deshmukh, Sarah Cohen, Richa Khanna, Malavika Raman, Zachary S. Nevin, Madeline Matia, Jonas Van Lent, Vincent Timmerman, Bruce R. Conklin, Katherine Johnson Chase, Ke Zhang, Salome Funes, Daryl A. Bosco, Lena Erlebach, Marc Welzer, Deborah Kronenberg-Versteeg, Guo-Chang Lyu, Ernest Arenas, Elena Coccia, Lily Sarrafha, Tim Ahfeldt, John Carlo Marioni, William C. Skarnes, Mark R. Cookson, Michael E. Ward, Florian T. Merkle; Show fewer authors
A reference human induced pluripotent stem cell line for large-scale collaborative studies.
Cell Stem Cell 29:1685-1702.e22(2022)

Cross-references
Cell line collections (Providers) Coriell; GM23338
Cell line databases/resources hPSCreg; HVRDi004-B
SKIP; SKIP000178
SKIP; SKIP004355
Biological sample resources BioSample; SAMN00211020
BioSample; SAMN03485859
ENCODE; ENCBS368AAA
ENCODE; ENCBS373AAA
Encyclopedic resources Wikidata; Q54853011
Experimental variables resources EFO; EFO_0007950
Gene expression databases GEO; GSM1019346
GEO; GSM1019347
GEO; GSM1658378
GEO; GSM2072609
GEO; GSM2072610
Entry history
Entry creation22-Oct-2012
Last entry update10-Apr-2025
Version number21