Cellosaurus logo
expasy logo

Cellosaurus GD149 (CVCL_B4UH)

[Text][XML][JSON]
Cell line name GD149
Accession CVCL_B4UH
Resource Identification Initiative To cite this cell line use: GD149 (RRID:CVCL_B4UH)
Comments From: Ludwig Institute for Cancer Research, Lausanne Branch; Lausanne; Switzerland.
Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV).
Omics: Proteomics; HLA class I peptidome.
Omics: Proteomics; HLA class II peptidome.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
HLA typing Source: PubMed=28832583
Class I
HLA-AA*01:01,24:02
HLA-BB*38:01,44:03
HLA-CC*06:02,12:03

Source: PubMed=31611696
Class II
HLA-DPDPA1*01:03,02:01
DPB1*03:01(124:01),04:01(350:01)
HLA-DQDQA1*01:10,02:01
DQB1*02:02,06:03
HLA-DRDRB1*07:01,13:01
DRB3*01:01
DRB4*01:01
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Sex unspecified
Age at sampling Age unspecified
Category Transformed cell line
Publications

PubMed=28832583; DOI=10.1371/journal.pcbi.1005725; PMCID=PMC5584980
Michal Bassani-Sternberg, Chloe Chong, Philippe Guillaume, Marthe Solleder, HuiSong Pak, Philippe O. Gannon, Lana E. Kandalaft, George Coukos, David Gfeller;
Deciphering HLA-I motifs across HLA peptidomes improves neo-antigen predictions and identifies allostery regulating HLA specificity.
PLoS Comput. Biol. 13:e1005725.1-e1005725.28(2017)

PubMed=31611696; DOI=10.1038/s41587-019-0289-6
Julien Racle, Justine Michaux, Georg Alexander Rockinger, Marion Arnaud, Sara Bobisse, Chloe Chong, Philippe Guillaume, George Coukos, Alexandre Harari, Camilla Jandus, Michal Bassani-Sternberg, David Gfeller;
Robust prediction of HLA class II epitopes by deep motif deconvolution of immunopeptidomes.
Nat. Biotechnol. 37:1283-1286(2019)

Cross-references
Encyclopedic resources Wikidata; Q110432810
Proteomic databases PRIDE; PXD012308
Entry history
Entry creation16-Dec-2021
Last entry update10-Apr-2025
Version number6