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Cellosaurus UCB1105 (CVCL_B4MD)

[Text version]
Cell line name UCB1105
Accession CVCL_B4MD
Resource Identification Initiative To cite this cell line use: UCB1105 (RRID:CVCL_B4MD)
Comments Part of: GenCord collection.
Population: Caucasian.
Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV).
Omics: Genomics; ChIP-seq; H3K27ac.
Omics: Genomics; ChIP-seq; H3K4me1.
Omics: Genomics; ChIP-seq; H3K4me3.
Omics: Transcriptomics; CAGE-seq.
Omics: Transcriptomics; RNAseq.
Derived from site: In situ; Umbilical cord blood; UBERON=UBERON_0012168.
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Male
Age at sampling <1D
Category Transformed cell line
Publications

PubMed=29116076; DOI=10.1038/s41467-017-01467-7; PMCID=PMC5677018
Marco Garieri, Olivier Delaneau, Federico Andrea Santoni, Richard J. Fish, David Mull, Piero Carninci, Emmanouil Theophilos Dermitzakis, Stylianos E. Antonarakis, Alexandre Fort;
The effect of genetic variation on promoter usage and enhancer activity.
Nat. Commun. 8:1358.1-1358.9(2017)

PubMed=31048460; DOI=10.1126/science.aat8266
Olivier Delaneau, Marianna Zazhytska, Christelle Borel, Giuliana Giannuzzi, Guillaume Rey, Cedric Howald, Sunil Kumar, Halit Ongen, Konstantin Y. Popadin, Daniel Marbach, Giovanna Ambrosini ...Show all 22 authors... , Deborah Bielser, David Lynn Hacker, Luciana Romano, Pascale Ribaux, Michael Wiederkehr, Emilie Falconnet, Philipp Bucher, Sven Bergmann, Stylianos E. Antonarakis, Alexandre Reymond, Emmanouil Theophilos Dermitzakis; Show fewer authors
Chromatin three-dimensional interactions mediate genetic effects on gene expression.
Science 364:eaat8266.1-eaat8266.10(2019)

Cross-references
Encyclopedic resources Wikidata; Q110433502
Gene expression databases ArrayExpress; E-MTAB-5835
Sequence databases EGA; EGAS00001003485
Entry history
Entry creation16-Dec-2021
Last entry update10-Apr-2025
Version number5