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Cellosaurus HPSI1213i-nekd_1 (CVCL_AI19)

[Text version]
Cell line name HPSI1213i-nekd_1
Synonyms WTSIi098-A
Accession CVCL_AI19
Resource Identification Initiative To cite this cell line use: HPSI1213i-nekd_1 (RRID:CVCL_AI19)
Comments From: Cambridge BioResource; Cambridge; United Kingdom.
From: Wellcome Trust Sanger Institute; Hinxton; United Kingdom.
Population: Caucasian; British.
Omics: Cellular phenotyping.
Omics: Deep exome analysis.
Omics: Deep proteome analysis.
Omics: Genome sequenced.
Omics: DNA methylation analysis.
Omics: Transcriptome analysis by microarray.
Omics: Transcriptome analysis by RNAseq.
Derived from site: In situ; Skin; UBERON=UBERON_0002097.
Cell type: Fibroblast of skin; CL=CL_0002620.
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Originate from same individual CVCL_JQ39 ! HPSI1213i-nekd_2
CVCL_JQ40 ! HPSI1213i-nekd_3
Sex of cell Male
Age at sampling 60-64Y
Category Induced pluripotent stem cell
Publications

PubMed=28489815; DOI=10.1038/nature22403
Kilpinen H., Goncalves A., Leha A., Afzal V., Alasoo K., Ashford S., Bala S., Bensaddek D., Casale F.P., Culley O.J., Danecek P., Faulconbridge A., Harrison P.W., Kathuria A., McCarthy D., McCarthy S.A., Meleckyte R., Memari Y., Moens N., Soares F., Mann A., Streeter I., Agu C.A., Alderton A., Nelson R., Harper S., Patel M.J., White A., Patel S.R., Clarke L., Halai R., Kirton C.M., Kolb-Kokocinski A., Beales P., Birney E., Danovi D., Lamond A.I., Ouwehand W.H., Vallier L., Watt F.M., Durbin R., Stegle O., Gaffney D.J.
Common genetic variation drives molecular heterogeneity in human iPSCs.
Nature 546:370-375(2017)

PubMed=30784590; DOI=10.1016/j.celrep.2019.01.094
Vigilante A., Laddach A., Moens N., Meleckyte R., Leha A., Ghahramani A., Culley O.J., Kathuria A., Hurling C., Vickers A., Wiseman E., Tewary M., Zandstra P.W., Durbin R., Fraternali F., Stegle O., Birney E., Luscombe N.M., Danovi D., Watt F.M.
Identifying extrinsic versus intrinsic drivers of variation in cell behavior in human iPSC lines from healthy donors.
Cell Rep. 26:2078-2087.e3(2019)

Cross-references
Cell line collections (Providers) ECACC; 77650028
Cell line databases/resources HipSci; HPSI1213i-nekd_1
hPSCreg; WTSIi098-A
SKIP; SKIP002713
Biological sample resources BioSamples; SAMEA2445783
Encyclopedic resources Wikidata; Q54891720
Gene expression databases ArrayExpress; E-MTAB-4057
Entry history
Entry creation23-Feb-2016
Last entry update29-Jun-2023
Version number16