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Cellosaurus HPSI0314i-sojd_3 (CVCL_AE87)

[Text version]
Cell line name HPSI0314i-sojd_3
Synonyms WTSIi073-A
Accession CVCL_AE87
Resource Identification Initiative To cite this cell line use: HPSI0314i-sojd_3 (RRID:CVCL_AE87)
Comments From: Cambridge BioResource; Cambridge; United Kingdom.
From: Wellcome Trust Sanger Institute; Hinxton; United Kingdom.
Population: Caucasian.
Omics: Deep exome analysis.
Omics: Deep proteome analysis.
Omics: Genome sequenced.
Omics: Transcriptome analysis by microarray.
Omics: Transcriptome analysis by RNAseq.
Derived from site: In situ; Skin; UBERON=UBERON_0002097.
Cell type: Fibroblast of skin; CL=CL_0002620.
Sequence variations
  • Mutation; HGNC; 20893; BCOR; Simple; p.Gln348Ter (c.1042C>T); Zygosity=Heterozygous (PubMed=31813827).
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Originate from same individual CVCL_JN04 ! HPSI0314i-sojd_1
CVCL_AE86 ! HPSI0314i-sojd_2
Sex of cell Female
Age at sampling 45-49Y
Category Induced pluripotent stem cell
Publications

PubMed=28489815; DOI=10.1038/nature22403; PMCID=PMC5524171
Kilpinen H., Goncalves A., Leha A., Afzal V., Alasoo K., Ashford S., Bala S., Bensaddek D., Casale F.P., Culley O.J., Danecek P., Faulconbridge A., Harrison P.W., Kathuria A., McCarthy D., McCarthy S.A., Meleckyte R., Memari Y., Moens N., Soares F., Mann A., Streeter I., Agu C.A., Alderton A., Nelson R., Harper S., Patel M.J., White A., Patel S.R., Clarke L., Halai R., Kirton C.M., Kolb-Kokocinski A., Beales P., Birney E., Danovi D., Lamond A.I., Ouwehand W.H., Vallier L., Watt F.M., Durbin R., Stegle O., Gaffney D.J.
Common genetic variation drives molecular heterogeneity in human iPSCs.
Nature 546:370-375(2017)

PubMed=31813827; DOI=10.1016/j.stemcr.2019.11.003; PMCID=PMC6915802
Hildebrandt M.R., Reuter M.S., Wei W., Tayebi N., Liu J.-J., Sharmin S., Mulder J., Lesperance L.S., Brauer P.M., Mok R.S.-F., Kinnear C., Piekna A., Romm A., Howe J., Pasceri P., Meng G.-L., Rozycki M., Rodrigues D.C., Martinez E.C., Szego M.J., Zuniga-Pflucker J.C., Anderson M.K., Prescott S.A., Rosenblum N.D., Kamath B.M., Mital S., Scherer S.W., Ellis J.
Precision health resource of control iPSC lines for versatile multilineage differentiation.
Stem Cell Reports 13:1126-1141(2019)

Cross-references
Cell line collections (Providers) EBiSC; WTSIi073-A - Discontinued
ECACC; 66540185 - Discontinued
ECACC; 77650126
Cell line databases/resources HipSci; HPSI0314i-sojd_3
hPSCreg; WTSIi073-A
SKIP; SKIP002662
Biological sample resources BioSamples; SAMEA2627569
Encyclopedic resources Wikidata; Q54890627
Gene expression databases ArrayExpress; E-MTAB-4057
Entry history
Entry creation23-Feb-2016
Last entry update30-Jan-2024
Version number16