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Cellosaurus BG01 (CVCL_9726)

[Text version]
Cell line name BG01
Synonyms hESBGN-01; HESBGN-01; BGN-01; BGO1; VIACe001-A; BresaGen 01
Accession CVCL_9726
Resource Identification Initiative To cite this cell line use: BG01 (RRID:CVCL_9726)
Comments From: ViaCyte, Inc. (originally from BresaGen); San Diego; USA.
Omics: Genomics; ChIP-seq; H3K27ac.
Omics: Genomics; ChIP-seq; H3K27me3.
Omics: Genomics; ChIP-seq; H3K4me1.
Omics: Genomics; ChIP-seq; H3K4me3.
Omics: Genomics; ChIP-seq; H3K9me3.
Omics: Transcriptomics; Microarray.
Omics: Transcriptomics; Serial analysis of gene expression (SAGE).
Derived from site: In situ; Blastocyst; UBERON=UBERON_0000358.
Cell type: Embryonic stem cell; CL=CL_0002322.
HLA typing Source: PubMed=16919167
Class I
HLA-AA*02,03
HLA-BB*35,49
HLA-CC*04,07
Class II
HLA-DQDQB1*02,03
HLA-DRDRB1*03,04
DRB3*01

Source: PubMed=15684826
Class I
HLA-AA*02:01,03:01
HLA-BB*35:03,49:01
HLA-CC*04:01,07:01
Class II
HLA-DQDQB1*02:01,03:01
HLA-DRDRB1*03:01,04:05
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Children:
CVCL_9727 (BG01V)CVCL_U170 (LT1e-OLIG2GFP)CVCL_IT25 (XLC081)
Sex of cell Male
Age at sampling Blastocyst stage
Category Embryonic stem cell
STR profile Source(s): PubMed=15684826; PubMed=16919167; WiCell=bg01

Markers:
AmelogeninX,Y
CSF1PO10
D2S133817,24
D3S135815,17
D5S81810,12
D7S82010,11
D8S117910,12
D13S31711,12
D16S5399,11
D18S5119
D19S43313,15
D21S1128,29
FGA22
TH017,9.3
TPOX8
vWA16,17

Run an STR similarity search on this cell line
Web pages Info; StemCellDB; -; https://stemcelldb.nih.gov/cellLineDetails/Agilent/6
Provider; BresaGen; -; https://web.archive.org/web/20150322205439/http://stemcells.nih.gov/staticresources/research/protocols/BresaGen_hESC_manual_2.1.pdf
Publications

PubMed=12968106; DOI=10.1634/stemcells.21-5-521
Maya Mitalipova, John Calhoun, Soojung Shin, David Wininger, Thomas Schulz, Scott A. Noggle, Alison Venable, Ian G. Lyons, Allan J. Robins, Steven L. Stice;
Human embryonic stem cell lines derived from discarded embryos.
Stem Cells 21:521-526(2003)

PubMed=15153607; DOI=10.1634/stemcells.22-3-292
Xian-Min Zeng, Takumi Miura, Yong-Quan Luo, Bhaskar Bhattacharya, Brian Condie, Jia Chen, Irene Ginis, Ian G. Lyons, Josef Mejido, Raj K. Puri, Mahendra Surendra Rao, William J. Freed;
Properties of pluripotent human embryonic stem cells BG01 and BG02.
Stem Cells 22:292-312(2004)

PubMed=15684826; DOI=10.1089/scd.2004.13.585
Sandii N. Brimble, Xian-Min Zeng, Deborah A. Weiler, Yong-Quan Luo, Ying Liu, Ian G. Lyons, William J. Freed, Allan J. Robins, Mahendra Surendra Rao, Thomas C. Schulz;
Karyotypic stability, genotyping, differentiation, feeder-free maintenance, and gene expression sampling in three human embryonic stem cell lines derived prior to August 9, 2001.
Stem Cells Dev. 13:585-597(2004)

PubMed=16919167; DOI=10.1186/1741-7007-4-28; PMCID=PMC1601965
Richard Josephson, Gregory R. Sykes, Ying Liu, Carol J. Ording, Wei-Ning Xu, Xian-Min Zeng, Soojung Shin, Jeanne Frances Loring, Anirban Maitra, Mahendra Surendra Rao, Jonathan M. Auerbach;
A molecular scheme for improved characterization of human embryonic stem cell lines.
BMC Biol. 4:28.1-28.13(2006)

PubMed=17570852; DOI=10.1186/gb-2007-8-6-r113; PMCID=PMC2394759
Martin Hirst, Allen Delaney, Sean A. Rogers, Angelique Schnerch, Deryck R. Persaud, Michael D. O'Connor, Thomas Zeng, Michelle Moksa, Keith Fichter, Diana Mah, Anne Go ...Show all 32 authors... , Ryan D. Morin, Agnes Baross, Yong-Jun Zhao, Jaswinder Khattra, Anna-Liisa Prabhu, Pawan Pandoh, Helen McDonald, Jennifer K. Asano, Noreen Dhalla, Kevin Ma, Stephanie Lee, Adrian Ally, Neil Chahal, Stephanie Menzies, Asim Siddiqui, Robert A. Holt, Steven J.M. Jones, Daniela S. Gerhard, James Alexander Thomson, Constance Jean Eaves, Marco Antonio Marra; Show fewer authors
LongSAGE profiling of nine human embryonic stem cell lines.
Genome Biol. 8:R113.1-R113.12(2007)

PubMed=17572666; DOI=10.1038/nbt1318
Oluseun Adewumi, Behrouz Aflatoonian, Lars Ahrlund-Richter, Michal Amit, Peter W. Andrews, Gemma Beighton, Paul A. Bello, Nissim Benvenisty, Lorraine S. Berry, Simon Bevan, Barak Blum ...Show all 85 authors... , Justin Brooking, Kevin G. Chen, Andre B.-H. Choo, Gary A. Churchill, Marie Corbel, Ivan Damjanov, Jonathan S. Draper, Petr Dvorak, Katarina Emanuelsson, Roland A. Fleck, Angela Ford, Karin Gertow, Marina Gertsenstein, Paul J. Gokhale, Rebecca S. Hamilton, Ales Hampl, Lyn E. Healy, Outi Hovatta, Johan Hyllner, Marta P. Imreh, Joseph Itskovitz-Eldor, Jamie Jackson, Jacqueline L. Johnson, Mark Jones, Kehkooi Kee, Benjamin L. King, Barbara B. Knowles, Majlinda Lako, Franck Lebrin, Barbara S. Mallon, Daisy Manning, Yoav Mayshar, Ronald Davies Graham McKay, Anna E. Michalska, Milla Mikkola, Maria Mileikovsky, Stephen Lewis Minger, Harry D. Moore, Christine L. Mummery, Andras Nagy, Norio Nakatsuji, Carmel M. O'Brien, Steve Kah-Weng Oh, Cia Olsson, Timo Otonkoski, Kye-Yoon Park, Robert Passier, Hema Patel, Minal J. Patel, Roger Arnold Pedersen, Martin F. Pera, Marian S. Piekarczyk, Renee A. Reijo Pera, Benjamin E. Reubinoff, Allan J. Robins, Janet Rossant, Peter Rugg-Gunn, Thomas C. Schulz, Henrik Semb, Eric S. Sherrer, Henrike Siemen, Glyn N. Stacey, Miodrag Stojkovic, Hirofumi Suemori, Jin Szatkiewicz, Tikva Tako Turetsky, Timo Tuuri, Stieneke van den Brink, Kristina Vintersten, Sanna Vuoristo, Dorien Ward-van Oostwaard, Thomas A. Weaver, Lesley A. Young, Wei-Dong Zhang; Show fewer authors
International Stem Cell Initiative
Characterization of human embryonic stem cell lines by the International Stem Cell Initiative.
Nat. Biotechnol. 25:803-816(2007)

PubMed=18772870; DOI=10.1038/nprot.2008.140
Stefan R. Braam, Chris Denning, Elena Matsa, Lorraine E. Young, Robert Passier, Christine L. Mummery;
Feeder-free culture of human embryonic stem cells in conditioned medium for efficient genetic modification.
Nat. Protoc. 3:1435-1443(2008)

PubMed=23117585; DOI=10.1016/j.scr.2012.09.002; PMCID=PMC3590800
Barbara S. Mallon, Joshua G. Chenoweth, Kory R. Johnson, Rebecca S. Hamilton, Paul J. Tesar, Amarendra S. Yavatkar, Leonard J. Tyson, Kyeyoon Park, Kevin G. Chen, Yang-Cheng Fann, Ronald Davies Graham McKay;
StemCellDB: the human pluripotent stem cell database at the National Institutes of Health.
Stem Cell Res. 10:57-66(2013)

PubMed=24172903; DOI=10.1038/nature12745
Ohad Gafni, Leehee Weinberger, Abed AlFatah Mansour, Yair S. Manor, Elad Chomsky, Dalit Ben-Yosef, Yael Kalma, Sergey Viukov, Itay Maza, Asaf Zviran, Yoach Rais ...Show all 27 authors... , Zohar Shipony, Zohar Mukamel, Vladislav Krupalnik, Mirie Zerbib, Shay Geula, Inbal Caspi, Dan Schneir, Tamar Shwartz, Shlomit Gilad, Daniela Amann-Zalcenstein, Sima Benjamin, Ido Amit, Amos Tanay, Rada Massarwa, Noa Novershtern, Jacob H. Hanna; Show fewer authors
Derivation of novel human ground state naive pluripotent stem cells.
Nature 504:282-286(2013)

Cross-references
Cell line collections (Providers) WiCell; bg01
Cell line databases/resources hPSCreg; VIACe001-A
SKIP; SKIP001938
TOKU-E; 4082
Biological sample resources ENCODE; ENCBS742FEC
Encyclopedic resources Wikidata; Q54796217
Experimental variables resources EFO; EFO_0007071
Gene expression databases GEO; GSM383872
GEO; GSM384094
GEO; GSM500932
GEO; GSM856719
GEO; GSM862730
GEO; GSM1272755
GEO; GSM1272756
GEO; GSM1272757
GEO; GSM1272758
GEO; GSM1272759
GEO; GSM1272760
Entry history
Entry creation06-Jun-2012
Last entry update10-Apr-2025
Version number23