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Cellosaurus BG01 (CVCL_9726)

[Text version]
Cell line name BG01
Synonyms hESBGN-01; HESBGN-01; BGN-01; BGO1; VIACe001-A; BresaGen 01
Accession CVCL_9726
Resource Identification Initiative To cite this cell line use: BG01 (RRID:CVCL_9726)
Comments From: ViaCyte, Inc. (originally from BresaGen); San Diego; USA.
Omics: Genomics; ChIP-seq; H3K27ac.
Omics: Genomics; ChIP-seq; H3K27me3.
Omics: Genomics; ChIP-seq; H3K4me1.
Omics: Genomics; ChIP-seq; H3K4me3.
Omics: Genomics; ChIP-seq; H3K9me3.
Omics: Transcriptomics; Microarray.
Omics: Transcriptomics; Serial analysis of gene expression (SAGE).
Derived from site: In situ; Blastocyst; UBERON=UBERON_0000358.
Cell type: Embryonic stem cell; CL=CL_0002322.
HLA typing Source: PubMed=16919167
Class I
HLA-AA*02,03
HLA-BB*35,49
HLA-CC*04,07
Class II
HLA-DQDQB1*02,03
HLA-DRDRB1*03,04
DRB3*01

Source: PubMed=15684826
Class I
HLA-AA*02:01,03:01
HLA-BB*35:03,49:01
HLA-CC*04:01,07:01
Class II
HLA-DQDQB1*02:01,03:01
HLA-DRDRB1*03:01,04:05
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Children:
CVCL_9727 (BG01V)CVCL_U170 (LT1e-OLIG2GFP)CVCL_IT25 (XLC081)
Sex of cell Male
Age at sampling Blastocyst stage
Category Embryonic stem cell
STR profile Source(s): PubMed=15684826; PubMed=16919167; WiCell=bg01

Markers:
AmelogeninX,Y
CSF1PO10
D2S133817,24
D3S135815,17
D5S81810,12
D7S82010,11
D8S117910,12
D13S31711,12
D16S5399,11
D18S5119
D19S43313,15
D21S1128,29
FGA22
TH017,9.3
TPOX8
vWA16,17

Run an STR similarity search on this cell line
Web pages Info; StemCellDB; -; https://stemcelldb.nih.gov/cellLineDetails/Agilent/6
Provider; BresaGen; -; https://web.archive.org/web/20150322205439/http://stemcells.nih.gov/staticresources/research/protocols/BresaGen_hESC_manual_2.1.pdf
Publications

PubMed=12968106; DOI=10.1634/stemcells.21-5-521
Mitalipova M., Calhoun J., Shin S., Wininger D., Schulz T., Noggle S.A., Venable A., Lyons I.G., Robins A.J., Stice S.L.
Human embryonic stem cell lines derived from discarded embryos.
Stem Cells 21:521-526(2003)

PubMed=15153607; DOI=10.1634/stemcells.22-3-292
Zeng X.-M., Miura T., Luo Y.-Q., Bhattacharya B., Condie B., Chen J., Ginis I., Lyons I.G., Mejido J., Puri R.K., Rao M.S., Freed W.J.
Properties of pluripotent human embryonic stem cells BG01 and BG02.
Stem Cells 22:292-312(2004)

PubMed=15684826; DOI=10.1089/scd.2004.13.585
Brimble S.N., Zeng X.-M., Weiler D.A., Luo Y.-Q., Liu Y., Lyons I.G., Freed W.J., Robins A.J., Rao M.S., Schulz T.C.
Karyotypic stability, genotyping, differentiation, feeder-free maintenance, and gene expression sampling in three human embryonic stem cell lines derived prior to August 9, 2001.
Stem Cells Dev. 13:585-597(2004)

PubMed=16919167; DOI=10.1186/1741-7007-4-28; PMCID=PMC1601965
Josephson R., Sykes G.R., Liu Y., Ording C.J., Xu W.-N., Zeng X.-M., Shin S., Loring J.F., Maitra A., Rao M.S., Auerbach J.M.
A molecular scheme for improved characterization of human embryonic stem cell lines.
BMC Biol. 4:28.1-28.13(2006)

PubMed=17570852; DOI=10.1186/gb-2007-8-6-r113; PMCID=PMC2394759
Hirst M., Delaney A., Rogers S.A., Schnerch A., Persaud D.R., O'Connor M.D., Zeng T., Moksa M., Fichter K., Mah D., Go A., Morin R.D., Baross A., Zhao Y.-J., Khattra J., Prabhu A.-L., Pandoh P., McDonald H., Asano J.K., Dhalla N., Ma K., Lee S., Ally A., Chahal N., Menzies S., Siddiqui A., Holt R.A., Jones S.J.M., Gerhard D.S., Thomson J.A., Eaves C.J., Marra M.A.
LongSAGE profiling of nine human embryonic stem cell lines.
Genome Biol. 8:R113.1-R113.12(2007)

PubMed=17572666; DOI=10.1038/nbt1318
Adewumi O., Aflatoonian B., Ahrlund-Richter L., Amit M., Andrews P.W., Beighton G., Bello P.A., Benvenisty N., Berry L.S., Bevan S., Blum B., Brooking J., Chen K.G., Choo A.B.-H., Churchill G.A., Corbel M., Damjanov I., Draper J.S., Dvorak P., Emanuelsson K., Fleck R.A., Ford A., Gertow K., Gertsenstein M., Gokhale P.J., Hamilton R.S., Hampl A., Healy L.E., Hovatta O., Hyllner J., Imreh M.P., Itskovitz-Eldor J., Jackson J., Johnson J.L., Jones M., Kee K., King B.L., Knowles B.B., Lako M., Lebrin F., Mallon B.S., Manning D., Mayshar Y., McKay R.D.G., Michalska A.E., Mikkola M., Mileikovsky M., Minger S.L., Moore H.D., Mummery C.L., Nagy A., Nakatsuji N., O'Brien C.M., Oh S.K.-W., Olsson C., Otonkoski T., Park K.-Y., Passier R., Patel H., Patel M.J., Pedersen R., Pera M.F., Piekarczyk M.S., Reijo Pera R.A., Reubinoff B.E., Robins A.J., Rossant J., Rugg-Gunn P., Schulz T.C., Semb H., Sherrer E.S., Siemen H., Stacey G.N., Stojkovic M., Suemori H., Szatkiewicz J., Turetsky T.T., Tuuri T., van den Brink S., Vintersten K., Vuoristo S., Ward-van Oostwaard D., Weaver T.A., Young L.A., Zhang W.-D.
International Stem Cell Initiative
Characterization of human embryonic stem cell lines by the International Stem Cell Initiative.
Nat. Biotechnol. 25:803-816(2007)

PubMed=18772870; DOI=10.1038/nprot.2008.140
Braam S.R., Denning C., Matsa E., Young L.E., Passier R., Mummery C.L.
Feeder-free culture of human embryonic stem cells in conditioned medium for efficient genetic modification.
Nat. Protoc. 3:1435-1443(2008)

PubMed=23117585; DOI=10.1016/j.scr.2012.09.002; PMCID=PMC3590800
Mallon B.S., Chenoweth J.G., Johnson K.R., Hamilton R.S., Tesar P.J., Yavatkar A.S., Tyson L.J., Park K., Chen K.G., Fann Y.-C., McKay R.D.G.
StemCellDB: the human pluripotent stem cell database at the National Institutes of Health.
Stem Cell Res. 10:57-66(2013)

PubMed=24172903; DOI=10.1038/nature12745
Gafni O., Weinberger L., Mansour A.A., Manor Y.S., Chomsky E., Ben-Yosef D., Kalma Y., Viukov S., Maza I., Zviran A., Rais Y., Shipony Z., Mukamel Z., Krupalnik V., Zerbib M., Geula S., Caspi I., Schneir D., Shwartz T., Gilad S., Amann-Zalcenstein D., Benjamin S., Amit I., Tanay A., Massarwa R., Novershtern N., Hanna J.H.
Derivation of novel human ground state naive pluripotent stem cells.
Nature 504:282-286(2013)

Cross-references
Cell line collections (Providers) WiCell; bg01
Cell line databases/resources hPSCreg; VIACe001-A
SKIP; SKIP001938
TOKU-E; 4082
Biological sample resources ENCODE; ENCBS742FEC
Encyclopedic resources Wikidata; Q54796217
Experimental variables resources EFO; EFO_0007071
Gene expression databases GEO; GSM383872
GEO; GSM384094
GEO; GSM500932
GEO; GSM856719
GEO; GSM862730
GEO; GSM1272755
GEO; GSM1272756
GEO; GSM1272757
GEO; GSM1272758
GEO; GSM1272759
GEO; GSM1272760
Entry history
Entry creation06-Jun-2012
Last entry update10-Apr-2025
Version number23