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Cellosaurus HS-ES-2M (CVCL_8714)

[Text version]
Cell line name HS-ES-2M
Synonyms HSES2M
Accession CVCL_8714
Resource Identification Initiative To cite this cell line use: HS-ES-2M (RRID:CVCL_8714)
Comments Population: Japanese.
Omics: H3K27ac ChIP-seq epigenome analysis.
Omics: H3K27me3 ChIP-seq epigenome analysis.
Omics: H3K4me3 ChIP-seq epigenome analysis.
Omics: Transcriptome analysis by RNAseq.
Derived from site: Metastatic; Lung; UBERON=UBERON_0002048.
Sequence variations
  • Gene deletion; HGNC; 11103; SMARCB1; Zygosity=Heterozygous (PubMed=28945250).
Disease Epithelioid sarcoma (NCIt: C3714)
Epithelioid sarcoma (ORDO: Orphanet_293202)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Children:
CVCL_QW56 (HS-ES-2M BAF47)
Originate from same individual CVCL_8715 ! HS-ES-2R
Sex of cell Male
Age at sampling Age unspecified
Category Cancer cell line
STR profile Source(s): RCB=RCB2360

Markers:
AmelogeninX,Y
CSF1PO10,12
D5S81811
D7S8208
D13S31712
D16S53910,11
TH017,9
TPOX8
vWA17,18

Run an STR similarity search on this cell line
Publications

PubMed=28945250; DOI=10.1038/ng.3958; PMCID=PMC5803080
Nakayama R.T., Pulice J.L., Valencia A.M., McBride M.J., McKenzie Z.M., Gillespie M.A., Ku W.L., Teng M.-X., Cui K.-R., Williams R.T., Cassel S.H., Qing H., Widmer C.J., Demetri G.D., Irizarry R.A., Zhao K.-J., Ranish J.A., Kadoch C.
SMARCB1 is required for widespread BAF complex-mediated activation of enhancers and bivalent promoters.
Nat. Genet. 49:1613-1623(2017)

Cross-references
Cell line collections (Providers) RCB; RCB2360
Cell line databases/resources CLO; CLO_0050149
Biological sample resources BioSample; SAMN03471971
Encyclopedic resources Wikidata; Q54006384
Gene expression databases GEO; GSM2409682
GEO; GSM2409683
GEO; GSM2409684
GEO; GSM2409685
GEO; GSM2409686
GEO; GSM2409687
GEO; GSM2787356
Entry history
Entry creation04-Apr-2012
Last entry update02-May-2024
Version number19