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Cellosaurus UM-SCC-104 (CVCL_7712)

[Text version]
Cell line name UM-SCC-104
Synonyms UMSCC-104; UMSCC104; University of Michigan-Squamous Cell Carcinoma-104
Accession CVCL_7712
Resource Identification Initiative To cite this cell line use: UM-SCC-104 (RRID:CVCL_7712)
Comments Doubling time: 48 hours (PubMed=22162267); 2.6 days (PubMed=29156801).
Transformant: NCBI_TaxID; 333760; Human papillomavirus type 16 (HPV16).
Omics: Genomics; Whole exome sequencing.
Omics: Genomics; Whole genome sequencing; Low read coverage.
Omics: Proteomics; Expression; Reverse-phase protein array.
Omics: Transcriptomics; RNAseq.
Omics: Variations; CNV analysis.
Sequence variations
  • Mutation; HGNC; HGNC:3595; FAT1; Simple; p.Ile1829Val (c.5485A>G); Zygosity=Homozygous (PubMed=31541927).
  • Mutation; HGNC; HGNC:7881; NOTCH1; Simple; p.Ala12Val (c.35C>T); ClinVar=VCV001494610; Zygosity=Homozygous (PubMed=31541927).
Disease Floor of mouth squamous cell carcinoma (NCIt: C4041)
Squamous cell carcinoma of the oral cavity (ORDO: Orphanet_502363)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Male
Age at sampling 56Y
Category Cancer cell line
STR profile Source(s): Millipore=SCC072; PubMed=22162267; PubMed=29156801

Markers:
AmelogeninX (Millipore=SCC072)
X,Y (PubMed=22162267; PubMed=29156801)
CSF1PO10 (Millipore=SCC072; PubMed=22162267)
10,12 (PubMed=29156801)
D2S133817,20
D3S135817
D5S81812
D7S82010
D8S11799,13
D13S3178 (Millipore=SCC072)
8,9 (PubMed=22162267; PubMed=29156801)
D16S5399 (Millipore=SCC072; PubMed=22162267)
9,13 (PubMed=29156801)
D18S5113,14
D19S43314,15.2
D21S1130,32.2
FGA24
Penta D9,12
Penta E13
TH016
TPOX9,10
vWA16,17

Run an STR similarity search on this cell line
Publications

PubMed=22162267; DOI=10.1002/hed.21962; PMCID=PMC3369005
Alice L. Tang, Samantha Jill Hauff, John Henry Owen, Martin P. Graham, Michael J. Czerwinski, Jung Je Park, Heather M. Walline, Silvana Papagerakis, Jay Stoerker, Jonathan B. McHugh, Douglas Brian Chepeha ...Show all 14 authors... , Carol R. Bradford, Thomas E. Carey, Mark Edward P. Prince; Show fewer authors
UM-SCC-104: a new human papillomavirus-16-positive cancer stem cell-containing head and neck squamous cell carcinoma cell line.
Head Neck 34:1480-1491(2012)

PubMed=24201445; DOI=10.1101/gr.164806.113; PMCID=PMC3912410
Keiko Akagi, Jing-Feng Li, Tatevik R. Broutian, Hesed Maria Padilla-Nash, Wei-Hong Xiao, Bo Jiang, James W. Rocco, Theodoros Null Teknos, Bhavna Kumar, Danny Wangsa, Dan He ...Show all 14 authors... , Thomas Ried, David E. Symer, Maura Lianne Gillison; Show fewer authors
Genome-wide analysis of HPV integration in human cancers reveals recurrent, focal genomic instability.
Genome Res. 24:185-199(2014)

PubMed=26045983; PMCID=PMC4449432
Frank Ziemann, Andrea Arenz, Stefanie Preising, Claus Wittekindt, Jens Peter Klussmann, Rita Engenhart-Cabillic, Andrea Wittig;
Increased sensitivity of HPV-positive head and neck cancer cell lines to X-irradiation +/- cisplatin due to decreased expression of E6 and E7 oncoproteins and enhanced apoptosis.
Am. J. Cancer Res. 5:1017-1031(2015)

PubMed=28236344; DOI=10.1002/hed.24729; PMCID=PMC5392184
Heather M. Walline, Christine Marie Goudsmit, Jonathan B. McHugh, Alice L. Tang, John Henry Owen, Bin Tean Teh, Erin L. McKean, Thomas W. Glover, Martin P. Graham, Mark Edward P. Prince, Douglas Brian Chepeha ...Show all 19 authors... , Steven B. Chinn, Robert Louis Ferris, Susanne M. Gollin, Thomas K. Hoffmann, Henning Bier, Ruud H. Brakenhoff, Carol R. Bradford, Thomas E. Carey; Show fewer authors
University of Michigan Head and Neck Specialized Program of Research Excellence (SPORE) Program
Integration of high-risk human papillomavirus into cellular cancer-related genes in head and neck cancer cell lines.
Head Neck 39:840-852(2017)

PubMed=29156801; DOI=10.18632/oncotarget.21174; PMCID=PMC5689691
Nene N. Kalu, Tuhina Mazumdar, Shao-Hua Peng, Li Shen, Vaishnav Sambandam, Xia-Yu Rao, Yuan-Xin Xi, Le-Rong Li, Yuan Qi, Frederico O. Gleber-Netto, Ameeta Patel ...Show all 16 authors... , Jing Wang, Mitchell J. Frederick, Jeffrey N. Myers, Curtis R. Pickering, Faye M. Johnson; Show fewer authors
Genomic characterization of human papillomavirus-positive and -negative human squamous cell cancer cell lines.
Oncotarget 8:86369-86383(2017)

PubMed=31541927; DOI=10.1016/j.oraloncology.2019.09.004; PMCID=PMC7372097
Anne M. van Harten, Jos B. Poell, Marijke Buijze, Arjen Brink, Susanne I. Wells, C. Rene Leemans, Rob M.F. Wolthuis, Ruud H. Brakenhoff;
Characterization of a head and neck cancer-derived cell line panel confirms the distinct TP53-proficient copy number-silent subclass.
Oral Oncol. 98:53-61(2019)

PubMed=32574978; DOI=10.1016/j.tranon.2020.100808; PMCID=PMC7317296
Thankam S. Nair, Trey B. Thomas, Lucy Yang, Bala Naveen Kakaraparthi, Anna C. Morris, Alanna M. Clark, Lora Perry Campredon, Andrew F. Brouwer, Marisa C. Eisenberg, Rafael Meza, Thomas E. Carey;
Characteristics of head and neck squamous cell carcinoma cell lines reflect human tumor biology independent of primary etiologies and HPV status.
Transl. Oncol. 13:100808.1-100808.9(2020)

Cross-references
Cell line collections (Providers) Millipore; SCC072
Cell line databases/resources cancercelllines; CVCL_7712
Encyclopedic resources Wikidata; Q54990797
Gene expression databases GEO; GSM3631290
Polymorphism and mutation databases Progenetix; CVCL_7712
Entry history
Entry creation04-Apr-2012
Last entry update10-Apr-2025
Version number25