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Cellosaurus GM01953 (CVCL_7344)

[Text version]
Cell line name GM01953
Synonyms GM-1953; GM1953; GM01953A; GM01079; GM-1079; GM17216
Accession CVCL_7344
Resource Identification Initiative To cite this cell line use: GM01953 (RRID:CVCL_7344)
Comments Part of: Genetic Testing Reference Material (GeT-RM) samples.
Part of: Human variation panel.
Population: Caucasian.
Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV).
Omics: Genomics; DNA methylation analysis.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
HLA typing Source: PubMed=29959025
Class I
HLA-AA*01:01:01,03:01:01
HLA-BB*08:01:01,35:01:01
HLA-CC*04:01:01,07:01:01
Class II
HLA-DPDPA1*01:03:01,02:06
DPB1*04:02:01,05:01:01
HLA-DQDQA1*01:01:01,05:01:01
DQB1*02:01:01,05:01:01
HLA-DRDRB1*01:01:01,03:01:01
DRB3*01:01:02
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Female
Age at sampling 22Y
Category Transformed cell line
Publications

DOI=10.5962/bhl.title.4090
Lewis Lemon Coriell, Arthur E. Greene;
The human genetic mutant cell repository: list of genetic variants, chromosomal aberrations and normal cell cultures submitted to the repository. 4th edition. October 1977.
(In misc. document) Institute for Medical Research (Camden, N.J.); pp.1-171; National Institutes of Health; Bethesda; USA (1977)

CLPUB00447
Richard A. Mulivor, Sharon F. Suchy;
1992/1993 catalog of cell lines. NIGMS human genetic mutant cell repository. 16th edition. October 1992.
(In misc. document) Institute for Medical Research (Camden, N.J.) NIH 92-2011; pp.1-918; National Institutes of Health; Bethesda; USA (1992)

PubMed=8483505; DOI=10.1038/363185a0
Anne O'Donovan, Richard Dean Wood;
Identical defects in DNA repair in xeroderma pigmentosum group G and rodent ERCC group 5.
Nature 363:185-188(1993)

PubMed=7519740; DOI=10.1016/0165-7992(94)90014-0
Christopher J. Jones, R. Stephen Lloyd, Richard Dean Wood;
Analysis of cells harboring a putative DNA repair gene reveals a lack of evidence for a second independent xeroderma pigmentosum group A correcting gene.
Mutat. Res. 324:159-164(1994)

PubMed=7664335; DOI=10.1016/0092-8674(95)90028-4
Karla A. Henning, Lei Li, Narayan Iyer, Lisa D. McDaniel, Michael S. Reagan, Randy J. Legerski, Roger A. Schultz, Miria Stefanini, Alan R. Lehmann, Lynne V. Mayne, Errol Clive Friedberg;
The Cockayne syndrome group A gene encodes a WD repeat protein that interacts with CSB protein and a subunit of RNA polymerase II TFIIH.
Cell 82:555-564(1995)

PubMed=9025096; DOI=10.1093/mutage/12.1.41
Takashi Yagi, Richard Dean Wood, Hiraku Takebe;
A low content of ERCC1 and a 120 kDa protein is a frequent feature of group F xeroderma pigmentosum fibroblast cells.
Mutagenesis 12:41-44(1997)

PubMed=14583597; DOI=10.1152/physiolgenomics.00163.2003
Tomi Pastinen, Robert Sladek, Scott Gurd, Alya'a Sammak, Bing Ge, Pierre Lepage, Karine Lavergne, Amelie Villeneuve, Tiffany Gaudin, Helena Brandstrom, Allon Beck ...Show all 20 authors... , Andrei Verner, Jade Kingsley, Eef Harmsen, Damian Labuda, Kenneth Morgan, Marie-Claude Vohl, Anna K. Naumova, Daniel Sinnett, Thomas James Hudson; Show fewer authors
A survey of genetic and epigenetic variation affecting human gene expression.
Physiol. Genomics 16:184-193(2004)

PubMed=16260726; DOI=10.1073/pnas.0508390102; PMCID=PMC1283473
Sandra L. Harris, German Gil, Harlan Robins, Wen-Wei Hu, Kim Marie Hirshfield, Elisabeth Bond, Gareth Bond, Arnold Jay Levine;
Detection of functional single-nucleotide polymorphisms that affect apoptosis.
Proc. Natl. Acad. Sci. U.S.A. 102:16297-16302(2005)

PubMed=20889555; DOI=10.2353/jmoldx.2010.100090; PMCID=PMC2962854
Victoria M. Pratt, Barbara A. Zehnbauer, Jean Amos Wilson, Ruth Epstein-Baak, Nikolina Babic, Maria P. Bettinotti, Arlene M. Buller-Burckle, Kenneth G. Butz, Matthew Campbell, Chris Civalier, Abdalla El-Badry ...Show all 29 authors... , Daniel H. Farkas, Elaine Lyon, Saptarshi Mandal, Jason McKinney, Kasinathan Muralidharan, LeAnne Noll, Tara Sander, Junaid Shabbeer, Ching-Ying Huang Smith, Milhan Telatar, Lorraine H. Toji, Anand Vairavan, Carlos Vance, Karen E. Weck, Alan H.B. Wu, Kiang-Teck J. Yeo, Markus Zeller, Lisa V. Kalman; Show fewer authors
Characterization of 107 genomic DNA reference materials for CYP2D6, CYP2C19, CYP2C9, VKORC1, and UGT1A1: a GeT-RM and Association for Molecular Pathology collaborative project.
J. Mol. Diagn. 12:835-846(2010)

PubMed=29959025; DOI=10.1016/j.jmoldx.2018.05.009; PMCID=PMC6939753
Maria P. Bettinotti, Deborah Ferriola, Jamie L. Duke, Timothy L. Mosbruger, Nikolaos Tairis, Lawrence Jennings, Lisa V. Kalman, Dimitrios S. Monos;
Characterization of 108 genomic DNA reference materials for 11 human leukocyte antigen loci: a GeT-RM collaborative project.
J. Mol. Diagn. 20:703-715(2018)

Cross-references
Cell line collections (Providers) Coriell; GM01079 - Discontinued
Coriell; GM01953
Coriell; GM17216
Cell line databases/resources CLO; CLO_0013888
CLO; CLO_0032336
Biological sample resources BioSample; SAMN00807332
Encyclopedic resources Wikidata; Q54837200
Gene expression databases GEO; GSM569530
GEO; GSM596280
GEO; GSM596640
GEO; GSM924818
Entry history
Entry creation04-Apr-2012
Last entry update10-Apr-2025
Version number24