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Cellosaurus WM1552C (CVCL_6472)

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Cell line name WM1552C
Synonyms WM-1552C; WM 1552C; WM-1552; WM1552; EST73
Accession CVCL_6472
Resource Identification Initiative To cite this cell line use: WM1552C (RRID:CVCL_6472)
Comments Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Part of: COSMIC cell lines project.
Part of: Wistar Institute melanoma cell line collection.
Population: Caucasian.
Microsatellite instability: Stable (MSS) (Sanger).
Omics: Genomics; DNA methylation analysis.
Omics: Genomics; Whole exome sequencing.
Omics: Phenotyping; Drug screening.
Omics: Proteomics; Quantitative.
Omics: Transcriptomics; Microarray.
Omics: Variations; Array-based CGH.
Omics: Variations; SNP array analysis.
Caution: The reported STR profile from Wistar of this cell line was changed at one point between February 2016 when we retrieved them and entered them in Cellosaurus and May 2018. The major changes were: D13S317: 12->11,12.
Derived from site: In situ; Hypodermis; UBERON=UBERON_0002072.
Sequence variations
HLA typing Source: PubMed=15592718
Class I
HLA-AA*03:01,02:01
HLA-BB*13:02,07:02
HLA-CC*07:02,06:02
Class II
HLA-DPDPB1*04:01,04:02
HLA-DQDQB1*06:02,02:01
HLA-DRDRB1*15:01,ND
Genome ancestry Source: PubMed=30894373

Origin% genome
African0
Native American0.24
East Asian, North0
East Asian, South1.1
South Asian2.39
European, North72.29
European, South23.98
Disease Cutaneous melanoma (NCIt: C3510)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Male
Age at sampling 72Y
Category Cancer cell line
STR profile Source(s): ATCC=CRL-2808; Cosmic-CLP=1299078; ESTDAB=ESTDAB-073; Wistar

Markers:
AmelogeninX
CSF1PO10
D2S133824,25
D3S135814
D5S81812
D7S82010,11,12 (ATCC=CRL-2808)
10,12 (Cosmic-CLP=1299078; ESTDAB=ESTDAB-073; Wistar)
D8S117911,12
D13S31711,12 (Wistar)
12 (Cosmic-CLP=1299078; ESTDAB=ESTDAB-073)
12,14 (ATCC=CRL-2808)
D16S5399,11
D18S5115
D19S43314
D21S1130
FGA22
TH019,9.3
TPOX8,11
vWA19

Run an STR similarity search on this cell line
Web pages Info; Wistar; -; https://www.wistar.org/our-scientists/meenhard-herlyn
Publications

PubMed=11123321; DOI=10.4049/jimmunol.166.1.432
Jian Li, Sarita Pereira, Patricia Van Belle, Ping Tsui, David E. Elder, David W. Speicher, Keith Deen, Alban Linnenbach, Rajasekharan Somasundaram, Rolf K. Swoboda, Dorothee Herlyn;
Isolation of the melanoma-associated antigen p23 using antibody phage display.
J. Immunol. 166:432-438(2001)

PubMed=15592718; DOI=10.1007/s00262-004-0561-5; PMCID=PMC11032966
Teresa Rodriguez, Rosa Mendez, Chrissy H. Roberts, Francisco Ruiz-Cabello Osuna, I. Anthony Dodi, Miguel Angel Lopez-Nevot, Laura Paco, Isabel Maleno, Steven G.E. Marsh, Graham Pawelec, Federico Garrido;
High frequency of homozygosity of the HLA region in melanoma cell lines reveals a pattern compatible with extensive loss of heterozygosity.
Cancer Immunol. Immunother. 54:141-148(2005)

PubMed=17260012; DOI=10.1038/sj.onc.1210252
Goran Jonsson, Christina Dahl, Johan Staaf, Troy Sandberg, Par-Ola Bendahl, Markus Ringner, Per Guldberg, Ake Borg;
Genomic profiling of malignant melanoma using tiling-resolution arrayCGH.
Oncogene 26:4738-4748(2007)

PubMed=19340423; DOI=10.1007/s00262-009-0701-z; PMCID=PMC11030131
Rosa Mendez, Natalia Aptsiauri, Ana Del Campo, Isabel Maleno, Teresa Cabrera, Francisco Ruiz-Cabello Osuna, Federico Garrido, Angel Garcia-Lora;
HLA and melanoma: multiple alterations in HLA class I and II expression in human melanoma cell lines from ESTDAB cell bank.
Cancer Immunol. Immunother. 58:1507-1515(2009)

PubMed=21343389; DOI=10.1158/0008-5472.CAN-10-2958; PMCID=PMC3070783
Amy E. Rose, Laura Poliseno, Jin-Hua Wang, Michael Clark, Alexander Pearlman, Gui-Min Wang, Eleazar Carmelo Vega y Saenz de Miera, Ratna Medicherla, Paul J. Christos, Richard Shapiro, Anna Pavlick ...Show all 17 authors... , Farbod Darvishian, Jiri Zavadil, David Polsky, Eva Hernando, Harry Ostrer, Iman Osman; Show fewer authors
Integrative genomics identifies molecular alterations that challenge the linear model of melanoma progression.
Cancer Res. 71:2561-2571(2011)

PubMed=23851445; DOI=10.1158/1541-7786.MCR-13-0006
Christina Dahl, Claus Christensen, Goran Jonsson, Anders Lorentzen, Mette Louise Skjodt, Ake Borg, Graham Pawelec, Per Guldberg;
Mutual exclusivity analysis of genetic and epigenetic drivers in melanoma identifies a link between p14 ARF and RARbeta signaling.
Mol. Cancer Res. 11:1166-1178(2013)

PubMed=27397505; DOI=10.1016/j.cell.2016.06.017; PMCID=PMC4967469
Francesco Iorio, Theo A. Knijnenburg, Daniel J. Vis, Graham Robert Bignell, Michael Patrick Menden, Michael Schubert, Nanne Aben, Emanuel Goncalves, Syd Barthorpe, Howard Lightfoot, Thomas Cokelaer ...Show all 39 authors... , Patricia Greninger, Ewald van Dyk, Han Chang, Heshani de Silva, Holger Heyn, Xian-Ming Deng, Regina K. Egan, Qing-Song Liu, Tatiana Mironenko, Xeni Mitropoulos, Laura Richardson, Jin-Hua Wang, Ting-Hu Zhang, Sebastian Moran, Sergi Sayols, Maryam Soleimani, David Tamborero, Nuria Lopez-Bigas, Petra Ross-Macdonald, Manel Esteller, Nathanael S. Gray, Daniel Arie Haber, Michael Rudolf Stratton, Cyril Henri Benes, Lodewyk F.A. Wessels, Julio Saez-Rodriguez, Ultan McDermott, Mathew J. Garnett; Show fewer authors
A landscape of pharmacogenomic interactions in cancer.
Cell 166:740-754(2016)

PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747; PMCID=PMC6445675
Julie Dutil, Zhi-Hua Chen, Alvaro N.A. Monteiro, Jamie K. Teer, Steven A. Eschrich;
An interactive resource to probe genetic diversity and estimated ancestry in cancer cell lines.
Cancer Res. 79:1263-1273(2019)

PubMed=35839778; DOI=10.1016/j.ccell.2022.06.010; PMCID=PMC9387775
Emanuel Goncalves, Rebecca C. Poulos, Zhao-Xiang Cai, Syd Barthorpe, Srikanth S. Manda, Natasha Lucas, Alexandra Beck, Daniel Bucio-Noble, Michael Dausmann, Caitlin Hall, Michael Hecker ...Show all 32 authors... , Jennifer Koh, Howard Lightfoot, Sadia Mahboob, Iman Mali, James Morris, Laura Richardson, Akila J. Seneviratne, Rebecca Shepherd, Erin Sykes, Frances Thomas, Sara Valentini, Steven G. Williams, Yang-Xiu Wu, Dylan Xavier, Karen L. MacKenzie, Peter G. Hains, Brett Tully, Phillip James Robinson, Qing Zhong, Mathew J. Garnett, Roger Robert Reddel; Show fewer authors
Pan-cancer proteomic map of 949 human cell lines.
Cancer Cell 40:835-849.e8(2022)

Cross-references
Cell line collections (Providers) ATCC; CRL-2808 - Discontinued
Rockland; WM1552C-01-0001
Cell line databases/resources CLO; CLO_0009614
cancercelllines; CVCL_6472
Cell_Model_Passport; SIDM00976
Cosmic-CLP; 1299078
DepMap; ACH-002205
ESTDAB; ESTDAB-073
LINCS_HMS; 50568
LINCS_LDP; LCL-1261
Biological sample resources BioSample; SAMN03471792
Chemistry resources GDSC; 1299078
PharmacoDB; WM1552C_1668_2019
Encyclopedic resources Wikidata; Q54994175
Gene expression databases ArrayExpress; E-MTAB-3610
GEO; GSM156020
GEO; GSM186469
GEO; GSM186470
GEO; GSM555134
GEO; GSM555186
GEO; GSM952582
GEO; GSM1670577
Polymorphism and mutation databases Cosmic; 886833
Cosmic; 1047652
Cosmic; 1303064
Cosmic; 1995664
Cosmic; 2159426
Cosmic; 2163802
IARC_TP53; 26079
Progenetix; CVCL_6472
Proteomic databases PRIDE; PXD030304
Sequence databases EGA; EGAS00001000978
Entry history
Entry creation04-Apr-2012
Last entry update14-Aug-2025
Version number40