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Cellosaurus DEOC-1 (CVCL_4161)

[Text version]
Cell line name DEOC-1
Synonyms DEOC1
Accession CVCL_4161
Resource Identification Initiative To cite this cell line use: DEOC-1 (RRID:CVCL_4161)
Comments Population: Japanese.
Doubling time: 81.2 hours (Note=At 6th passage), 100 hours (Note=At 20th passage) (PubMed=17547717).
Karyotypic information: Has lost chromosome Y.
Omics: Transcriptomics; RNAseq.
Omics: Variations; SNP array analysis.
Derived from site: In situ; Heel, skin; UBERON=UBERON_0015873.
HLA typing Source: PubMed=26589293
Class I
HLA-AA*24:02,26:01
HLA-BB*40:02,52:01
HLA-CC*03:04,12:02
Disease Melanoma (NCIt: C3224)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Male
Age at sampling 59Y
Category Cancer cell line
STR profile Source(s): PubMed=25877200; RCB=RCB2831

Markers:
AmelogeninX
CSF1PO12
D3S135815,17
D5S81811,12
D7S82010
D8S117911
D13S3178,10
D16S53910
D18S5121
D21S1129,32
FGA19,26
Penta D9,11
Penta E12,19
TH019
TPOX11
vWA14,17

Run an STR similarity search on this cell line
Publications

PubMed=17547717; DOI=10.1111/j.1749-0774.2007.00028.x
Seiji Maeshima, Takashi Yamada, Kimihiro Kiyokane, Hiroshi Mori;
Establishment and characterization of a cell line (DEOC-1) originating from a human malignant melanoma of the skin.
Hum. Cell 20:23-38(2007)

PubMed=25485619; DOI=10.1038/nbt.3080
Christiaan Klijn, Steffen Durinck, Eric W. Stawiski, Peter M. Haverty, Zhao-Shi Jiang, Han-Bin Liu, Jeremiah Degenhardt, Oleg Mayba, Florian Gnad, Jin-Feng Liu, Gregoire Pau ...Show all 30 authors... , Jens Reeder, Yi Cao, Kiran Mukhyala, Suresh K. Selvaraj, Ma-Mie Yu, Gregory J. Zynda, Matthew J. Brauer, Thomas D. Wu, Robert Clifford Gentleman, Gerard Manning, Robert L. Yauch, Richard Bourgon, David Stokoe, Zora Modrusan, Richard M. Neve, Frederic J. de Sauvage, Jeffrey Settleman, Somasekar Seshagiri, Ze-Min Zhang; Show fewer authors
A comprehensive transcriptional portrait of human cancer cell lines.
Nat. Biotechnol. 33:306-312(2015)

PubMed=25877200; DOI=10.1038/nature14397
Ma-Mie Yu, Suresh K. Selvaraj, May M.Y. Liang-Chu, Sahar Aghajani, Matthew Busse, Jean Yuan, Genee Lee, Franklin V. Peale, Christiaan Klijn, Richard Bourgon, Joshua S. Kaminker, Richard M. Neve;
A resource for cell line authentication, annotation and quality control.
Nature 520:307-311(2015)

PubMed=26589293; DOI=10.1186/s13073-015-0240-5; PMCID=PMC4653878
Jelle Scholtalbers, Sebastian Boegel, Thomas Bukur, Marius Byl, Sebastian Goerges, Patrick Sorn, Martin Loewer, Ugur Sahin, John C. Castle;
TCLP: an online cancer cell line catalogue integrating HLA type, predicted neo-epitopes, virus and gene expression.
Genome Med. 7:118.1-118.7(2015)

Cross-references
Cell line collections (Providers) RCB; RCB2831
Cell line databases/resources CLO; CLO_0050137
Biological sample resources BioSample; SAMN03472898
Chemistry resources PharmacoDB; DEOC1_287_2019
Encyclopedic resources Wikidata; Q54830977
Experimental variables resources EFO; EFO_0006563
Gene expression databases ArrayExpress; E-MTAB-2706
Polymorphism and mutation databases Cosmic; 874387
Cosmic; 1007159
Sequence databases EGA; EGAS00001000610
Entry history
Entry creation04-Apr-2012
Last entry update10-Apr-2025
Version number21