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Cellosaurus TASK1 (CVCL_3177)

[Text version]
Cell line name TASK1
Accession CVCL_3177
Resource Identification Initiative To cite this cell line use: TASK1 (RRID:CVCL_3177)
Comments Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Part of: COSMIC cell lines project.
Population: Japanese.
Doubling time: 38 hours (PubMed=9661044).
Microsatellite instability: Stable (MSS) (Sanger).
Omics: Genomics; DNA methylation analysis.
Omics: Genomics; Whole exome sequencing.
Omics: Phenotyping; Drug screening.
Omics: Transcriptomics; Microarray.
Omics: Variations; SNP array analysis.
Derived from site: In situ; Chest wall; UBERON=UBERON_0016435.
Sequence variations
Genome ancestry Source: PubMed=30894373

Origin% genome
African1.94
Native American0.97
East Asian, North86.4
East Asian, South7.58
South Asian0.24
European, North0
European, South2.87
Disease Askin tumor (NCIt: C7542)
Peripheral primitive neuroectodermal tumor (ORDO: Orphanet_370348)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Female
Age at sampling 21Y
Category Cancer cell line
STR profile Source(s): Cosmic-CLP=1299067; DepMap=ACH-001670; JCRB=JCRB0139

Markers:
AmelogeninX
CSF1PO10
D3S135818
D5S81813
D7S82012
D8S117910
D13S3178
D16S53912
D18S5114
D21S1130,31
FGA23
Penta D9,11
Penta E5,11
TH019
TPOX11
vWA14,18

Run an STR similarity search on this cell line
Publications

PubMed=9661044; DOI=10.1007/s11626-998-0074-1
Hisashi Horiguchi, Miwa Matsui, Rieko Ohtsubo, Takesaburo Ogata, Michio Kaneko, Masachika Fujiwara, Hiroshi Kamma;
Establishment and characterization of a typical primitive neuroectodermal tumor cell line.
In Vitro Cell. Dev. Biol. Anim. 34:439-442(1998)

PubMed=20215515; DOI=10.1158/0008-5472.CAN-09-3458; PMCID=PMC2881662
S. Michael Rothenberg, Gayatry Mohapatra, Miguel N. Rivera, Daniel Winokur, Patricia Greninger, Mai Nitta, Peter M. Sadow, Gaya Sooriyakumar, Brian W. Brannigan, Matthew J. Ulman, Rushika M. Perera ...Show all 22 authors... , Rui Wang, Angela Tam, Xiao-Jun Ma, Mark Erlander, Dennis C. Sgroi, James W. Rocco, Mark W. Lingen, Ezra E.W. Cohen, David Neil Louis, Jeffrey Settleman, Daniel Arie Haber; Show fewer authors
A genome-wide screen for microdeletions reveals disruption of polarity complex genes in diverse human cancers.
Cancer Res. 70:2158-2164(2010)

PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747; PMCID=PMC6445675
Julie Dutil, Zhi-Hua Chen, Alvaro N.A. Monteiro, Jamie K. Teer, Steven A. Eschrich;
An interactive resource to probe genetic diversity and estimated ancestry in cancer cell lines.
Cancer Res. 79:1263-1273(2019)

Cross-references
Cell line collections (Providers) JCRB; JCRB0139
JCRB; NIHS0202 - Discontinued
Cell line databases/resources CLO; CLO_0037092
cancercelllines; CVCL_3177
Cell_Model_Passport; SIDM00026
Cosmic-CLP; 1299067
DepMap; ACH-001670
LINCS_LDP; LCL-1114
Biological sample resources BioSample; SAMN03470806
Chemistry resources GDSC; 1299067
PharmacoDB; TASK1_1565_2019
Encyclopedic resources Wikidata; Q54971734
Gene expression databases ArrayExpress; E-MTAB-3610
FANTOM5_SSTAR; 10774-110F9
GEO; GSM827197
GEO; GSM1670524
Polymorphism and mutation databases Progenetix; CVCL_3177
Sequence databases EGA; EGAS00001000978
Entry history
Entry creation04-Apr-2012
Last entry update10-Apr-2025
Version number32