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Cellosaurus UM-UC-9 (CVCL_2753)

[Text version]
Cell line name UM-UC-9
Synonyms UMUC9; UC-9; University of Michigan-Urothelial Carcinoma-9
Accession CVCL_2753
Resource Identification Initiative To cite this cell line use: UM-UC-9 (RRID:CVCL_2753)
Comments Part of: BLA-40 bladder carcinoma cell line panel.
Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Part of: MD Anderson Cell Lines Project.
Part of: UBC-40 urothelial bladder cancer cell line index.
Omics: Genomics; Whole exome sequencing.
Omics: Proteomics; Expression; Reverse-phase protein array.
Omics: Transcriptomics; Microarray.
Omics: Variations; CNV analysis.
Omics: Variations; SNP array analysis.
Caution: PubMed=27270441 reports a STR profile (CSF1PO: 10; D13S317: 11; D16S539: 9,11; D5S818: 13; D7S820: 8,10; TH01: 7; TPOX: 8; vWA: 17,19) which is completely different from that of DepMap and ECACC.
Derived from site: In situ; Urinary bladder; UBERON=UBERON_0001255.
Sequence variations
  • Mutation; HGNC; HGNC:795; ATM; Simple; p.Ile2888Thr (c.8663T>C); ClinVar=VCV000245842; Zygosity=Heterozygous (PubMed=27270441).
  • Mutation; HGNC; HGNC:11998; TP53; Simple; p.Leu348fs (c.1044delG); Zygosity=Unspecified (PubMed=27270441).
Disease Bladder carcinoma (NCIt: C4912)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Sex unspecified
Age at sampling Age unspecified
Category Cancer cell line
STR profile Source(s): DepMap=ACH-001416; ECACC=08090505

Markers:
AmelogeninX
CSF1PO12,13
D3S135814,17
D5S81812
D7S8209,11
D8S117912,14 (DepMap=ACH-001416)
14 (ECACC=08090505)
D13S31711,13
D16S53911,13
D18S5116,17
D21S1129
FGA22,25,26
Penta D10
Penta E7,12
TH019
TPOX11
vWA16,17

Run an STR similarity search on this cell line
Web pages Info; MCLP; -; https://tcpaportal.org/mclp/
Info; Synapse; Bladder Cancer exome; https://www.synapse.org/Synapse:syn4970200
Publications

PubMed=16469639; DOI=10.1016/S0022-5347(05)00323-X
Anita Lyn Sabichi, Afsaneh Keyhani, Noriyoshi Tanaka, Jorge Delacerda, I-Ling Lee, Chang-Ping Zou, Jian-Hua Zhou, William F. Benedict, Herbert Barton Grossman;
Characterization of a panel of cell lines derived from urothelial neoplasms: genetic alterations, growth in vivo and the relationship of adenoviral mediated gene transfer to coxsackie adenovirus receptor expression.
J. Urol. 175:1133-1137(2006)

PubMed=18812553; DOI=10.1093/jnci/djn304; PMCID=PMC2720731
Hong-Seok Park, Weon Seo Park, Jolanta Bondaruk, Noriyoshi Tanaka, Hiroshi Katayama, Sangkyou Lee, Philippe E. Spiess, Jordan R. Steinberg, Zhi Wang, Ruth L. Katz, Colin Padraic Neal Dinney ...Show all 18 authors... , Keren J. Elias, Yair Lotan, Rizwan C. Naeem, Keith Baggerly, Subrata Sen, Herbert Barton Grossman, Bogdan Czerniak; Show fewer authors
Quantitation of Aurora kinase A gene copy number in urine sediments and bladder cancer detection.
J. Natl. Cancer Inst. 100:1401-1411(2008)

PubMed=19375735; DOI=10.1016/j.juro.2009.01.108; PMCID=PMC2680455
Edmund Chiong, Ali Dadbin, Loleta D. Harris, Anita Lyn Sabichi, Herbert Barton Grossman;
The use of short tandem repeat profiling to characterize human bladder cancer cell lines.
J. Urol. 181:2737-2748(2009)

PubMed=24018021; DOI=10.1016/j.eururo.2013.08.052
Yves Allory, Willemien Beukers, Ana Sagrera, Marta Flandez, Miriam Marques, Mirari Marquez, Kirstin A. van der Keur, Lars Dyrskjot, Irene Lurkin, Marcel Vermeij, Alfredo Carrato ...Show all 24 authors... , Josep Lloreta, Jose A. Lorente, Enrique Carrillo-de-Santa-Pau, Roy G. Masius, Manolis Kogevinas, Ewout Willem Steyerberg, Angela A.G. van Tilborg, Cheno Abas, Torben Falck Orntoft, Tahlita C.M. Zuiverloon, Nuria Malats, Ellen C. Zwarthoff, Francisco X. Real; Show fewer authors
Telomerase reverse transcriptase promoter mutations in bladder cancer: high frequency across stages, detection in urine, and lack of association with outcome.
Eur. Urol. 65:360-366(2014)

PubMed=25997541; DOI=10.1186/s12864-015-1450-3; PMCID=PMC4470036
Julie Earl, Daniel Rico, Enrique Carrillo-de-Santa-Pau, Benjamin Rodriguez-Santiago, Marinela Mendez-Pertuz, Herbert Auer, Gonzalo Gomez, Herbert Barton Grossman, David G. Pisano, Wolfgang A. Schulz, Luis A. Perez-Jurado ...Show all 16 authors... , Alfredo Carrato, Dan Theodorescu, Stephen Jacob Chanock, Alfonso Valencia, Francisco X. Real; Show fewer authors
The UBC-40 Urothelial Bladder Cancer cell line index: a genomic resource for functional studies.
BMC Genomics 16:403.1-403.16(2015)

PubMed=27270441; DOI=10.1038/onc.2016.172; PMCID=PMC5140783
Michael L. Nickerson, Nicolle Witte, Kate McGee Im, Sevilay Turan, Charles R. Owens, Kevin Misner, Shirley X. Tsang, Zhi-Ming Cai, Sen Wu, Michael Dean, James C. Costello, Dan Theodorescu;
Molecular analysis of urothelial cancer cell lines for modeling tumor biology and drug response.
Oncogene 36:35-46(2017)

PubMed=28196595; DOI=10.1016/j.ccell.2017.01.005; PMCID=PMC5501076
Jun Li, Wei Zhao, Rehan Akbani, Wen-Bin Liu, Zhen-Lin Ju, Shi-Yun Ling, Christopher P. Vellano, Paul Roebuck, Qing-Hua Yu, A. Karina Eterovic, Lauren Averett Byers ...Show all 25 authors... , Michael A. Davies, Wan-Leng Deng, Y.N. Vashisht Gopal, Guo Chen, Erika Maria von Euw, Dennis Joseph Slamon, Dylan Conklin, John Victor Heymach, Adi F. Gazdar, John D. Minna, Jeffrey N. Myers, Yi-Ling Lu, Gordon B. Mills, Han Liang; Show fewer authors
Characterization of human cancer cell lines by reverse-phase protein arrays.
Cancer Cell 31:225-239(2017)

PubMed=29732388; DOI=10.3233/BLC-180167; PMCID=PMC5929350
Tahlita C.M. Zuiverloon, Florus C. de Jong, James C. Costello, Dan Theodorescu;
Systematic review: characteristics and preclinical uses of bladder cancer cell lines.
Bladder Cancer 4:169-183(2018)

Cross-references
Cell line collections (Providers) CancerTools; 160439
ECACC; 08090505 - Discontinued
Cell line databases/resources cancercelllines; CVCL_2753
Cell_Model_Passport; SIDM01401
DepMap; ACH-001416
Anatomy/cell type resources BTO; BTO_0004990
Encyclopedic resources Wikidata; Q54990997
Gene expression databases GEO; GSM136260
GEO; GSM1574565
Polymorphism and mutation databases Cosmic; 846274
Cosmic; 1082650
Cosmic; 2037971
Cosmic; 2700986
Entry history
Entry creation04-Apr-2012
Last entry update10-Apr-2025
Version number28