Cellosaurus logo
expasy logo

Cellosaurus HCC38 BL (CVCL_1268)

[Text version]
Cell line name HCC38 BL
Synonyms HCC-38BL; HCC38-BL; HCC 38BL; HCC38BL; Hamon Cancer Center 38 BL
Accession CVCL_1268
Resource Identification Initiative To cite this cell line use: HCC38 BL (RRID:CVCL_1268)
Comments Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Population: Caucasian.
Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV).
Omics: Deep exome analysis.
Omics: SNP array analysis.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
Cell type: B-cell; CL=CL_0000236.
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Originate from same individual CVCL_1267 ! HCC38
Sex of cell Female
Age at sampling 50Y
Category Transformed cell line
STR profile Source(s): ATCC; KCLB

Markers:
AmelogeninX
CSF1PO11,12
D5S8189,12
D7S82010
D13S31712,14
D16S53910,14
FGA21,24
TH017,9.3 (ATCC)
8,9.3 (KCLB)
TPOX9,12
vWA16,17

Run an STR similarity search on this cell line
Publications

PubMed=9833771; DOI=10.1002/(SICI)1097-0215(19981209)78:6<766::AID-IJC15>3.0.CO;2-L
Gazdar A.F., Kurvari V., Virmani A.K., Gollahon L., Sakaguchi M., Westerfield M., Kodagoda D.R., Stasny V., Cunningham H.T., Wistuba I.I., Tomlinson G.E., Tonk V., Ashfaq R., Leitch A.M., Minna J.D., Shay J.W.
Characterization of paired tumor and non-tumor cell lines established from patients with breast cancer.
Int. J. Cancer 78:766-774(1998)

PubMed=14762065; DOI=10.1101/gr.2012304
Bignell G.R., Huang J., Greshock J., Watt S., Butler A.P., West S., Grigorova M., Jones K.W., Wei W., Stratton M.R., Futreal P.A., Weber B., Shapero M.H., Wooster R.
High-resolution analysis of DNA copy number using oligonucleotide microarrays.
Genome Res. 14:287-295(2004)

PubMed=20164919; DOI=10.1038/nature08768
Bignell G.R., Greenman C.D., Davies H., Butler A.P., Edkins S., Andrews J.M., Buck G., Chen L., Beare D., Latimer C., Widaa S., Hinton J., Fahey C., Fu B.-Y., Swamy S., Dalgliesh G.L., Teh B.T., Deloukas P., Yang F.-T., Campbell P.J., Futreal P.A., Stratton M.R.
Signatures of mutation and selection in the cancer genome.
Nature 463:893-898(2010)

PubMed=24176112; DOI=10.1186/gb-2013-14-10-r110
Daemen A., Griffith O.L., Heiser L.M., Wang N.J., Enache O.M., Sanborn Z., Pepin F., Durinck S., Korkola J.E., Griffith M., Hur J.S., Huh N., Chung J., Cope L., Fackler M.J., Umbricht C.B., Sukumar S., Seth P., Sukhatme V.P., Jakkula L.R., Lu Y.-L., Mills G.B., Cho R.J., Collisson E.A., van 't Veer L.J., Spellman P.T., Gray J.W.
Modeling precision treatment of breast cancer.
Genome Biol. 14:R110.1-R110.14(2013)

Cross-references
Cell line collections (Providers) ATCC; CRL-2346
KCLB; 9S0038BL
Cell line databases/resources CLO; CLO_0003656
cancercelllines; CVCL_1268
Cell_Model_Passport; SIDM00674
DepMap; ACH-002377
Biological sample resources BioSample; SAMN03471826
Chemistry resources PharmacoDB; HCC38BL_501_2019
Encyclopedic resources Wikidata; Q54881713
Gene expression databases GEO; GSM854626
GEO; GSM1172968
Polymorphism and mutation databases Progenetix; CVCL_1268
Entry history
Entry creation04-Apr-2012
Last entry update05-Oct-2023
Version number25