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Cellosaurus HCC1008 (CVCL_1244)

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Cell line name HCC1008
Synonyms Hamon Cancer Center 1008
Accession CVCL_1244
Resource Identification Initiative To cite this cell line use: HCC1008 (RRID:CVCL_1244)
Comments Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Part of: JWGray breast cancer cell line panel.
Population: African American.
Omics: Genomics; Whole exome sequencing.
Omics: Transcriptomics; Microarray.
Omics: Variations; Array-based CGH.
Omics: Variations; SNP array analysis.
Miscellaneous: Direct author submission of STR profile from Girard, Luc & Gazdar, Adi F.
Derived from site: Metastatic; Axillary lymph node; UBERON=UBERON_0001097.
Disease Breast ductal carcinoma (NCIt: C4017)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Originate from same individual CVCL_3374 ! HCC1007
CVCL_3282 ! HCC1007 BL
Sex of cell Female
Age at sampling 67Y
Category Cancer cell line
STR profile Source(s): ATCC=CRL-2320; Direct_author_submission; PubMed=25877200

Markers:
AmelogeninX
CSF1PO12,13
D2S44111
D2S133821
D3S135816
D5S81813
D7S82010
D8S117914,16
D10S124812
D12S39115,20
D13S31712
D16S53914,15
D18S5117
D19S43313.2 (Direct_author_submission)
13.2,14.2 (ATCC=CRL-2320; PubMed=25877200)
D21S1129
D22S104514,15
FGA23
Penta D8,12
Penta E9,11
TH017
TPOX6,11 (ATCC=CRL-2320; PubMed=25877200)
11 (Direct_author_submission)
vWA17,19

Run an STR similarity search on this cell line
Web pages Info; Synapse; JWGray panel; https://www.synapse.org/#!Synapse:syn2346643/wiki/62255
Provider; UT Southwestern; -; https://www.utsouthwestern.edu/edumedia/edufiles/about_us/admin_offices/technology_development/available_technologies/cell-lines.pdf
Publications

PubMed=9833771; DOI=10.1002/(SICI)1097-0215(19981209)78:6<766::AID-IJC15>3.0.CO;2-L
Adi F. Gazdar, Venkatesh Kurvari, Arvind K. Virmani, Lauren S. Gollahon, Masahiro Sakaguchi, Max Westerfield, Dulmini R. Kodagoda, Victor Stasny, H. Thomas Cunningham, Ignacio Ivan Wistuba, Gail E. Tomlinson ...Show all 16 authors... , Vijay Tonk, Raheela Ashfaq, A. Marilyn Leitch, John D. Minna, Jerry W. Shay; Show fewer authors
Characterization of paired tumor and non-tumor cell lines established from patients with breast cancer.
Int. J. Cancer 78:766-774(1998)

PubMed=11314036; DOI=10.1038/sj.onc.1204211
Eva Forgacs, Jonathan D. Wren, Craig Kamibayashi, Masashi Kondo, Xie L. Xu, Sanford David Markowitz, Gail E. Tomlinson, Carolyn Y. Muller, Adi F. Gazdar, Harold Ray Garner, John D. Minna;
Searching for microsatellite mutations in coding regions in lung, breast, ovarian and colorectal cancers.
Oncogene 20:1005-1009(2001)

PubMed=16959974; DOI=10.1126/science.1133427
Tobias Sjoblom, Sian Jones, Laura DeLong Wood, D. Williams Parsons, Jimmy Lin, Thomas D. Barber, Diana Mandelker, Rebecca J. Leary, Janine Ptak, Natalie Silliman, Steve Szabo ...Show all 29 authors... , Phillip Buckhaults, Christopher Farrell, Paul Meeh, Sanford David Markowitz, Joseph E. Willis, Dawn Dawson, James K.V. Willson, Adi F. Gazdar, James Hartigan, Leo Wu, Chang-Sheng Liu, Giovanni Parmigiani, Ben Ho Park, Kurtis E. Bachman, Nickolas Papadopoulos, Bert Vogelstein, Kenneth Wayne Kinzler, Victor E. Velculescu; Show fewer authors
The consensus coding sequences of human breast and colorectal cancers.
Science 314:268-274(2006)

PubMed=17932254; DOI=10.1126/science.1145720
Laura DeLong Wood, D. Williams Parsons, Sian Jones, Jimmy Lin, Tobias Sjoblom, Rebecca J. Leary, Dong Shen, Simina M. Boca, Thomas D. Barber, Janine Ptak, Natalie Silliman ...Show all 42 authors... , Steve Szabo, Zoltan Dezso, Vadim Ustyanksky, Tatiana Nikolskaya, Yuri Nikolsky, Rachel Karchin, Paul A. Wilson, Joshua S. Kaminker, Ze-Min Zhang, Randal Croshaw, Joseph E. Willis, Dawn Dawson, Michail Shipitsin, James K.V. Willson, Saraswati Sukumar, Kornelia Polyak, Ben Ho Park, Charit L. Pethiyagoda, P.V. Krishna Pant, Dennis G. Ballinger, Andrew B. Sparks, James Hartigan, Douglas R. Smith, Erick Suh, Nickolas Papadopoulos, Phillip Buckhaults, Sanford David Markowitz, Giovanni Parmigiani, Kenneth Wayne Kinzler, Victor E. Velculescu, Bert Vogelstein; Show fewer authors
The genomic landscapes of human breast and colorectal cancers.
Science 318:1108-1113(2007)

PubMed=20070913; DOI=10.1186/1471-2407-10-15; PMCID=PMC2836299
Katumi Tsuji, Shigeto Kawauchi, Soichiro Saito, Tomoko Furuya, Kenzo Ikemoto, Motonao Nakao, Shigeru Yamamoto, Masaaki Oka, Takashi Hirano, Kohsuke Sasaki;
Breast cancer cell lines carry cell line-specific genomic alterations that are distinct from aberrations in breast cancer tissues: comparison of the CGH profiles between cancer cell lines and primary cancer tissues.
BMC Cancer 10:15.1-15.10(2010)

PubMed=20215515; DOI=10.1158/0008-5472.CAN-09-3458; PMCID=PMC2881662
S. Michael Rothenberg, Gayatry Mohapatra, Miguel N. Rivera, Daniel Winokur, Patricia Greninger, Mai Nitta, Peter M. Sadow, Gaya Sooriyakumar, Brian W. Brannigan, Matthew J. Ulman, Rushika M. Perera ...Show all 22 authors... , Rui Wang, Angela Tam, Xiao-Jun Ma, Mark Erlander, Dennis C. Sgroi, James W. Rocco, Mark W. Lingen, Ezra E.W. Cohen, David Neil Louis, Jeffrey Settleman, Daniel Arie Haber; Show fewer authors
A genome-wide screen for microdeletions reveals disruption of polarity complex genes in diverse human cancers.
Cancer Res. 70:2158-2164(2010)

PubMed=24094812; DOI=10.1016/j.ccr.2013.08.020; PMCID=PMC3931310
Luika A. Timmerman, Thomas Holton, Mariia Yuneva, Raymond J. Louie, Merce Padro, Anneleen Daemen, Min Hu, Denise A. Chan, Stephen P. Ethier, Laura J. van 't Veer, Kornelia Polyak ...Show all 13 authors... , Frank McCormick, Joe W. Gray; Show fewer authors
Glutamine sensitivity analysis identifies the xCT antiporter as a common triple-negative breast tumor therapeutic target.
Cancer Cell 24:450-465(2013)

PubMed=24176112; DOI=10.1186/gb-2013-14-10-r110; PMCID=PMC3937590
Anneleen Daemen, Obi L. Griffith, Laura M. Heiser, Nicholas J. Wang, Oana M. Enache, Zachary Sanborn, Francois Pepin, Steffen Durinck, James E. Korkola, Malachi Griffith, Joe S. Hur ...Show all 27 authors... , Nam Huh, Jongsuk Chung, Leslie Cope, Mary Jo Fackler, Christopher Benedict Umbricht, Saraswati Sukumar, Pankaj Seth, Vikas P. Sukhatme, Lakshmi R. Jakkula, Yi-Ling Lu, Gordon B. Mills, Raymond J. Cho, Eric A. Collisson, Laura J. van 't Veer, Paul T. Spellman, Joe W. Gray; Show fewer authors
Modeling precision treatment of breast cancer.
Genome Biol. 14:R110.1-R110.14(2013)

PubMed=25877200; DOI=10.1038/nature14397
Ma-Mie Yu, Suresh K. Selvaraj, May M.Y. Liang-Chu, Sahar Aghajani, Matthew Busse, Jean Yuan, Genee Lee, Franklin V. Peale, Christiaan Klijn, Richard Bourgon, Joshua S. Kaminker, Richard M. Neve;
A resource for cell line authentication, annotation and quality control.
Nature 520:307-311(2015)

Cross-references
Cell line collections (Providers) ATCC; CRL-2320
Cell line databases/resources CLO; CLO_0003629
cancercelllines; CVCL_1244
DepMap; ACH-001514
IGRhCellID; HCC1008
Biological sample resources BioSample; SAMN03473055
Chemistry resources PharmacoDB; HCC1008_464_2019
Encyclopedic resources Wikidata; Q54881519
Experimental variables resources EFO; EFO_0002057
Gene expression databases ArrayExpress; E-MTAB-38
ArrayExpress; E-TABM-157
GEO; GSM533399
GEO; GSM533406
GEO; GSM537969
GEO; GSM783931
GEO; GSM847318
GEO; GSM847472
Polymorphism and mutation databases Cosmic; 904359
Cosmic; 1235076
Cosmic; 1287883
Cosmic; 1430344
Cosmic; 1473073
Cosmic; 1518106
Cosmic; 1603197
Progenetix; CVCL_1244
Entry history
Entry creation04-Apr-2012
Last entry update14-Aug-2025
Version number33